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PLM1_100_b1_sep16_scaffold_459_14

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 9825..10895

Top 3 Functional Annotations

Value Algorithm Source
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 328.0
  • Bit_score: 276
  • Evalue 5.40e-72
Pseudouridine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 325.0
  • Bit_score: 384
  • Evalue 6.50e-104
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 332.0
  • Bit_score: 387
  • Evalue 1.40e-104

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
GTGTCGGCTCAACGACTATTGATTGATGGGCGGTCGACTGGGGCGCGGCTCGACTTGTATCTGACGCGTCATTTCCTGGCCGAGCCGCACGCCTCGAGTATGTTGAGCCGGTCGGGAATTCAAAGACTCATTGCTGAAGGGCAGGTGACTCTCAACGGCGGGCGAGCCAAAGCGAGCACCCGACTCAAGCTGAACGATCGTATCGACATCCGTCCACTGCCGCCGCGCGAATCGACGCTTGAATCCGAAGCCCTCCCGCTCGATATTATCTACGAAGACCCCGACTGCATCGTAATCAACAAAGCTCCTGGAATGGTCGTTCACCCTGCGGCGAGTCAACACCGCGGTACACTAGTGAACGCGCTACTGCACCATTGTCCGGACTTGGAGGGAATCGGCGGCGAGCGCAGGCCCGGAATCGTTCACCGTTTGGATAAGGATACTTCGGGCGTCATGATCGTCGCAAAGACGGCGTCGGCATTTCACTCTCTCGTTGCTCAGTTCAAGCGTCGCACGGTAAAAAAGGATTATGTCGCGTTGGTTTGGGGTAAAACCCAAGCGGACAAGGGGATTATCGATCGCCCGATCGGCCGTCACCGTTCAGACCGGAAGCGGATGTCAAGCGTGCATTTTTTGAATAAATCTCGCGACGCGGTGACTGAATGGAGCGTTGAAGAGAGGTTTGCATTGGATTCAACCTCGAATTCTCGTATCTGGCTGACAGTCCTTAGACTCCATCCTCGGACCGGGCGGACCCACCAGATTCGGGTGCACCTTGCCGATCTCGGTTATCCCGTTGTGGGCGATAGAGTTTATGGGGGCAGACGAAACAAATCCGTAGTCGCGACTTCGTCCAATTCGATTATCGCTGCCTTTCCAAGGCAAGCTCTTCATGCCGAAAGATTAGCCATCGACCATGTGCGTACCGGCCGGCGCGTAGAATTCTACGCCCCCCTCGCCGATGATCTGCGCGATCTCTTGCGCCATTTGCAGGTTGCAAACTCTCCTTCACCGATCCGTCTTAGCAACTATTCGCTTGCGGGGGTTGACAAGAAAAGGGCTTTAAAATAG
PROTEIN sequence
Length: 357
VSAQRLLIDGRSTGARLDLYLTRHFLAEPHASSMLSRSGIQRLIAEGQVTLNGGRAKASTRLKLNDRIDIRPLPPRESTLESEALPLDIIYEDPDCIVINKAPGMVVHPAASQHRGTLVNALLHHCPDLEGIGGERRPGIVHRLDKDTSGVMIVAKTASAFHSLVAQFKRRTVKKDYVALVWGKTQADKGIIDRPIGRHRSDRKRMSSVHFLNKSRDAVTEWSVEERFALDSTSNSRIWLTVLRLHPRTGRTHQIRVHLADLGYPVVGDRVYGGRRNKSVVATSSNSIIAAFPRQALHAERLAIDHVRTGRRVEFYAPLADDLRDLLRHLQVANSPSPIRLSNYSLAGVDKKRALK*