ggKbase home page

PLM1_100_b1_sep16_scaffold_3279_5

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2542..3237)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 233.0
  • Bit_score: 157
  • Evalue 1.10e-35
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 220.0
  • Bit_score: 96
  • Evalue 6.50e-18
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 224.0
  • Bit_score: 171
  • Evalue 1.00e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGAGAAACGTCCTAAACAAACGCTTGCTCGTACTTTAAAGTGCGCTACCTTCTTCGCGAAAATAGTTCTGATCTCAGCGCTTTTTATTCCGGCATTTTTTGCATTTAAACAATTTTCCGGCCAGGCGAAAAAACCGGCGGCGGCAACTACCGTAAAAATAGTCGAAGTCGCCGAGAGACCACGATCCAAGGAACTTGTTAAAATTTACTCCATCGTGAAATCACACCGTCCCGATATTAACGATTCCGAGGCTTGGAGTGTTGCGGAAGTGATTTTGGGAGAAAGCGCCAAACGCAAACTCGACCCTCTTTTGGTGCTGGCATTGATTCGGGTGGAAAGCGATTTTCAGTACGCCGTCGTATCACCGAGCGGCGCGCGCGGTCTCATGCAAATCATGCCCGACACCGGTAAGTTTCTTTCCGAGGTCCTCGGCCGGGAATCTAACCTGCGCCCGGTCGCATTCAGACCGGAGTCATTGGATGACCCGCATTTCAATATCCGCTTGGGAACCTATTATCTTCACGATCTAAAGAAGCAATTCCAGGATTTAACCCTCACACTTACCGCTTACAACTTTGGTCCGGTTGAGATTCAAAATCGTCTTGACAACAATCTTGAGTTTCCGTCCGACTTTGCCTCCCTGGTTCTAGACGCTTACGAGCGCTACAAGAAAGCCCGGCAGCCGACGTTTTAG
PROTEIN sequence
Length: 232
MEKRPKQTLARTLKCATFFAKIVLISALFIPAFFAFKQFSGQAKKPAAATTVKIVEVAERPRSKELVKIYSIVKSHRPDINDSEAWSVAEVILGESAKRKLDPLLVLALIRVESDFQYAVVSPSGARGLMQIMPDTGKFLSEVLGRESNLRPVAFRPESLDDPHFNIRLGTYYLHDLKKQFQDLTLTLTAYNFGPVEIQNRLDNNLEFPSDFASLVLDAYERYKKARQPTF*