ggKbase home page

PLM1_100_b1_sep16_scaffold_3023_5

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3022..3993

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 294.0
  • Bit_score: 131
  • Evalue 9.00e-28
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 23.6
  • Coverage: 301.0
  • Bit_score: 67
  • Evalue 4.50e-09
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 315.0
  • Bit_score: 414
  • Evalue 7.50e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGACGCAGGTCCGGCGAATTTTCATCGTCGTCGTCACGGTTCTCTTTGCCGCGACGATCCACGCGCGAGCCATCACCGGAGCCGATCTCAGGAAAGTTACATTTTCCTACTCCGCGGTGAGCATGACCTGGTTCCCGGTAAAAGTGGCTCTGGAGAAGGGCTTCTTTCGCAACGAAGGGCTGGAGCCGCAGCTGATTCAGATGAACGGTAACGTCGCGACCGTTGCGCTCGCCAACGGCCATATCGATTTCTCGCTAAATATCTCGCCCGTGCTCAACGGCGCGATGCAAGGTCTCGGCACAAAACTGGTCACTGCATTGAATTCCCGTCCGTTGTTCGCTCTCGTCGTACGCCCGGAGATCACGTCGGCCGCCGATCTAAAAGGCAAAGTCTTCGCCGTCAGTTCCTTTGGCAACACCCAGGCCATCCTTACGGAGAAACATCTGCAGCACCTGGGACTGAGAAAAGGGGATTACCAATTATTAGCGATGGGCGCCACGCCGGCGCGCATCGCCGCCATGGAAAGGAACATCGCGCAGGGAAGCCTGATGCCGCCGCCGACAAACGTTCAGTTGGAAAATAAGGGTTATCGCCTCCTCGGCAACACGGCGGAAATAGTTATCAACCCGATTGCTGGTCTCGGCGTCCACGAGGACAGGATCAAAAAAGATCCCGAACTGATCAAACGGGCAATCCGAGCATCGTTACGCAGCCTGCAACTTTTGCAGATGAATCCGAAGGAGACCATTAAGATCCTGATGGATTGGACGCGCGCATCCGAAAAAGACGCGCTGCGATCACTCGAGCTCGCCAAGCCGGGTTTGAGCAAGAACGGCATGCTTACCGACGAGGATCTTGCGATCGAGTGGAGCTTTATTCAGCAGCAGACCAAGAAAACCAACGTGCCGGTTTCTATCGCCCACGACATGACACTGCTGCGCGAAGCGCAGGCGGAAGTCGGAATGAGATGA
PROTEIN sequence
Length: 324
MTQVRRIFIVVVTVLFAATIHARAITGADLRKVTFSYSAVSMTWFPVKVALEKGFFRNEGLEPQLIQMNGNVATVALANGHIDFSLNISPVLNGAMQGLGTKLVTALNSRPLFALVVRPEITSAADLKGKVFAVSSFGNTQAILTEKHLQHLGLRKGDYQLLAMGATPARIAAMERNIAQGSLMPPPTNVQLENKGYRLLGNTAEIVINPIAGLGVHEDRIKKDPELIKRAIRASLRSLQLLQMNPKETIKILMDWTRASEKDALRSLELAKPGLSKNGMLTDEDLAIEWSFIQQQTKKTNVPVSIAHDMTLLREAQAEVGMR*