ggKbase home page

PLM1_100_b1_sep16_scaffold_3038_12

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 10571..11683

Top 3 Functional Annotations

Value Algorithm Source
Queuine tRNA-ribosyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 310.0
  • Bit_score: 493
  • Evalue 1.00e-136
tgt-2; queuine tRNA-ribosyltransferase similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 357.0
  • Bit_score: 445
  • Evalue 9.20e-123
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 360.0
  • Bit_score: 554
  • Evalue 9.10e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGCTACTCATTTCACCGTCATCAAAAAAGATCCCAACACCAAGGCCCGCCTTGGCCGCCTGGTGACGGCGCATGGCGAGGTGGAGACGCCTTGCTTCATGCCCGTCGGAACGCAAGGTACGGTTAAAGCGATGCTGCCGCGGGATTTGACAGAGATGGGTTGTCAGATGTTGCTCAGCAATACCTATCATCTTTATCTGCGTCCCGGCCACGAATTGATTCGTGACCTCGGCGGTTTGCACCGCTTCATGAGCTGGCCCGGACCGATCTTGACCGACAGCGGCGGATATCAGGTTTTCAGCTTGGGCAAGATGCGCAAGATTTCCGAAGAGGGCGTGCGCTTTCAATCCCATCTGGATGGTTCTTCTCAGCTGCTCACGCCGGAGAAAGCCGTGGAAATTCAAGAAGCGCTCGGCAGCGATATCGCCATGGTGCTCGATGAATGTATCGCCCACGACGCGACTCGGGAATATGTGAGAATCTCCTCTGAGCGGACGATCCGGTGGGCCGAGCGTTGTCTTGGCGCGCGCAGCAAGCCCGATCAACTTATGTTCGGCATCATTCAAGGCGGCCTGTTCGAAGATTTGCGCCGCGGCTGCGTCGAGACCATGGCGCCGATGGCTTTCGAAGGATTTGCCGTGGGCGGGCTTGGCGTCGGCGAGGGCGAAGAACGACTCAACGCAATCGGCAGTTTTACGGCCGAACTGTTGCCCGAGGAACGGCCGCGCTATTTGATGGGCGTGGGGCGGCCCCAAGACATCGTCCACGCCGTGCGCGCCGGCTACGATTTATTCGACTGCGTCGTTCCGACGCGCAACGCGCGCAACGGCACGCTGTTTTCCGCGCAGGGAAAGATCAACATCAAGCGCGCCGAGTACGCCAACGACCCGCGGCCGCTCGACGAGTCTTGCGCCTGCTACTGCTGCCGTCATTTCTCGCGCGCCTACTTGCGCCATCTGTACATGGCCGGTGAAATCCTCTCGTCTCAGCTAAACAGCCTGCACAATCTTTACTTTTATCACCGGCTCATGGATAAGTGTCGGGAAGCGATCCGCGACGGCCGAGCCGAGCTGTGGACCGGGCTTTGCGCTATCGGCGATGCCCTTGAGTGA
PROTEIN sequence
Length: 371
MATHFTVIKKDPNTKARLGRLVTAHGEVETPCFMPVGTQGTVKAMLPRDLTEMGCQMLLSNTYHLYLRPGHELIRDLGGLHRFMSWPGPILTDSGGYQVFSLGKMRKISEEGVRFQSHLDGSSQLLTPEKAVEIQEALGSDIAMVLDECIAHDATREYVRISSERTIRWAERCLGARSKPDQLMFGIIQGGLFEDLRRGCVETMAPMAFEGFAVGGLGVGEGEERLNAIGSFTAELLPEERPRYLMGVGRPQDIVHAVRAGYDLFDCVVPTRNARNGTLFSAQGKINIKRAEYANDPRPLDESCACYCCRHFSRAYLRHLYMAGEILSSQLNSLHNLYFYHRLMDKCREAIRDGRAELWTGLCAIGDALE*