ggKbase home page

PLM1_100_b1_sep16_scaffold_1365_15

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(11097..11498)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP bin=GWA2_OP3_52_12 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 133.0
  • Bit_score: 208
  • Evalue 2.40e-51
endoribonuclease similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 132.0
  • Bit_score: 100
  • Evalue 3.40e-19
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 133.0
  • Bit_score: 201
  • Evalue 7.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGCCGTTTGAGCTGATAAATCCTAACGGATTGGAGTCGCCGGTTGGTTACGCGCACCTCGCCAAAATCACCGGTGGAACAGTGATTCACGTTGCCGGGCAAGCGCCCTTCGATGACAAGGGAATAGTAGTGGGCAAGGGCAATTTTGTCGCCCAGTTCGCCCAGGTCATACGCAATTTGAAAACCGCCATCGAGGCAGTCGGCGGACAGCCGAAGCATTACGCAGCGCTGACCATTTACATAACCAATCTCGAAGCCTACTGGGAGAACAAAAAAACCTTAGGATCAGCTTATCGAGACGTATTCGGGAAGTATTTTCCGGCCATTACCCTGGTCGAGGTCAAGCGTCTTTACAATCCTGATTGTATGATTGAAATCTCCGGCGTCGCGGTAATCGACTAA
PROTEIN sequence
Length: 134
MPFELINPNGLESPVGYAHLAKITGGTVIHVAGQAPFDDKGIVVGKGNFVAQFAQVIRNLKTAIEAVGGQPKHYAALTIYITNLEAYWENKKTLGSAYRDVFGKYFPAITLVEVKRLYNPDCMIEISGVAVID*