ggKbase home page

PLM1_100_b1_sep16_scaffold_6922_5

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2975..3649

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit bin=GWF2_Methylomirabilis_70_14 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 222.0
  • Bit_score: 345
  • Evalue 2.80e-92
putative polar amino acid ABC transporter, inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 227.0
  • Bit_score: 204
  • Evalue 1.60e-50
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 355
  • Evalue 2.90e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGGATTTTCAAGTCGTCTTTAACAACTTCGGCTTTCTGATCCTTCAAGGTTTCTTCGGCTTCGGAGCGTTTGCCGGCGGCACTCTGCGTTTGGCGCTGCCGGCCATCGTCCTCGGTTTCGTCCTCGGCACGTTCGTCGGACTGGCTCGGTTGGCGCACGCGCGGTGGATCAATTTACCGGCACGGATCTACGTGGAATTCTTTCGCGGCGTACCTCTGGTCATGGTGATTTTCTGGTTTTGGTTCATTATTCCGACGTTGGCTGGTAAATCGCTGCCGGAATACGCCGTCGCCCTAACCGCTTTCGTGATATTCGAGGCTGCCTATTTAGCCGAAATCGTCCGCGCGGGAATTCAGTCGGTGCCACGCGGCCAAGTCGAAGCCGCAACGGCGACCGGGCTTACGCGCGCTCCGATGATGCGCCATGTGATCCTGCCTCAAGCATTGCGCAACATGATTCCCGCACTCGTGACCCAATTTATCGTGCTGCTAAAGGACACCTCGCTGGCATCGATCATCGGTTACGTCGACCTCACGAAAGCCGCTCAGATCGTCAATAATCGTGAAATTCGTCCGTTCGAATTGTACCTTTTCATCGCAGGTGTTTACTGGCTTTGCAGCTACGCCATGTCGAGGTACGCCGCCCACTTGGAAGCCCGCTTGGCTAAACATTAG
PROTEIN sequence
Length: 225
MDFQVVFNNFGFLILQGFFGFGAFAGGTLRLALPAIVLGFVLGTFVGLARLAHARWINLPARIYVEFFRGVPLVMVIFWFWFIIPTLAGKSLPEYAVALTAFVIFEAAYLAEIVRAGIQSVPRGQVEAATATGLTRAPMMRHVILPQALRNMIPALVTQFIVLLKDTSLASIIGYVDLTKAAQIVNNREIRPFELYLFIAGVYWLCSYAMSRYAAHLEARLAKH*