ggKbase home page

PLM1_100_b1_sep16_scaffold_7081_1

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 150..737

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate-requiring enzyme bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 173.0
  • Bit_score: 108
  • Evalue 4.90e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 183.0
  • Bit_score: 101
  • Evalue 2.20e-19
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 190.0
  • Bit_score: 215
  • Evalue 5.30e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAAACGCTACGATTGTCTCAAACTTTTGTTGCCCATGGTCGACCAGCATATGCTGACGGTGACCAGCCTCTCGTCGAACACGGCTTTCTGGTCCGACTTGAGGCGCGAAGGGGCGAATTTTTTCGGTTGCAACATGGGGCTCTGTATTCCTTTTGCGCTGGGGCTCACGGCCGCCTTCCCCAAGCGCAAGGTCATCGCGCTCGATTCCGATGGCAGCTTGATGGTCGATAGCAGCAGCTTGATCACCGTGGCTGACGTGAGTCCGCCGAATTTCGTGGCGATCGTCATGGATAACGGCTCCTACGCGCGCATGGGCTCGACATTTACGACGCGCAAAACCGATCTGGAAAAAATCGCCCAGGGCGCGGGCATCGCCAACACCGCAACAGTTCGAAGTGAAGAAGCGCTCTCCGCCGCGGTGAAGCAAGCGCTCGCAACCAGCGGTCCGCATTTCATTGTCGCCAAGGTGGAGCCCGACAGAGTACGAGTCAAAGGCGATCCACACCGCACCTATGGCCGGTTCATGAGAGAATGTTTTATGGATGCCGTGCGCCGTCATCCCGATTACCAACAGGCAAGAAAATGA
PROTEIN sequence
Length: 196
MKRYDCLKLLLPMVDQHMLTVTSLSSNTAFWSDLRREGANFFGCNMGLCIPFALGLTAAFPKRKVIALDSDGSLMVDSSSLITVADVSPPNFVAIVMDNGSYARMGSTFTTRKTDLEKIAQGAGIANTATVRSEEALSAAVKQALATSGPHFIVAKVEPDRVRVKGDPHRTYGRFMRECFMDAVRRHPDYQQARK*