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PLM1_100_b1_sep16_scaffold_8827_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1770..2135)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QE43_DESB2 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 116.0
  • Bit_score: 148
  • Evalue 3.50e-33
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 116.0
  • Bit_score: 148
  • Evalue 9.90e-34
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 121.0
  • Bit_score: 184
  • Evalue 4.70e-44

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Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGAACCACAAAGATCTTGAATTTTTTCGAAGTCTCTTAAATCAGCGGATTAACGAGCTACGTTTGGAAGCGGGGAGAACCGTGGAAAATATGAATGAGGACGGAAATTTTCCCGACCCGACGGACCGCGCTCTGATGGAGTCAAATCGAAATTCCATCCTGCGTATCCGCGATCGCGAGCGCAAGCTGATTTTCAAGATCCAGGAAGCATTGCAACGTTTAAACGACGGCGAATACGGACTCTGCGAAGAGTGCGGCGAGGAGATCGGTATCGAGCGGCTTAAAGCGCGCCCGGTAACTACGCTTTGCATCGGCTGTAAGTCGAGCCAGGAGATCGAAGAGCGCAAAGCTAAGAGAGTCGTTTAA
PROTEIN sequence
Length: 122
VNHKDLEFFRSLLNQRINELRLEAGRTVENMNEDGNFPDPTDRALMESNRNSILRIRDRERKLIFKIQEALQRLNDGEYGLCEECGEEIGIERLKARPVTTLCIGCKSSQEIEERKAKRVV*