ggKbase home page

PLM1_100_b1_sep16_scaffold_11875_2

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1292..2395)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter ATP-binding component Tax=planctomycete KSU-1 RepID=I3IRL2_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 361.0
  • Bit_score: 345
  • Evalue 5.90e-92
spermidine/putrescine ABC transporter ATP-binding subunit similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 362.0
  • Bit_score: 323
  • Evalue 4.00e-86
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 383.0
  • Bit_score: 390
  • Evalue 2.20e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_PLX_64_10 → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGTTAGCGTTAAATTTGAGTCTGTCAGCAAGATCCTCGGCCAGTCCAGGGCAGTCGACAACCTGACCTTGGACATCGGCGCCGAGGAGCTGTTCTTTCTTTTGGGGCCGTCTGGATGCGGCAAAACCACGGCGCTCCGATTGGTCGCCGGGTTTTATACTCCCGACGACGGTCGAATCCTTTTTAACGGCCAAGACCAGAGCCGGGTGCCGCCCCACAAACGTAATACCGGAATGGTTTTTCAAAACTATGCGCTGTGGCCGCATATGGACGTGCGGAGTAACGTCGCCTACGGACTAAAGATGCGCCGTGTATCAGAAGCCGATAAAGAGAAGCGGGTTAGGCACGCCCTTGAAATCGTCCACATGCAGGCCTACGCCGAGCGCATACCGAATCAGCTTTCAGGCGGGCAGCAACAACGAGTCGCTCTCGCTCGTGCCTTGGTGATCGAGCCGGACGTGGTCTTATTGGATGAGCCGTTGTCCAATCTCGACGCCAAGCTGCGAGTAGAAATGCGCACGCAGATCAAAGACATCCACCGTAAAATCGGGCGCACGATGATCTACGTTACCCACGACCAAGCCGAGGCCTTATCGATGGCGGATCGTATTGCAGTTATGCGCCGTGGCCAGCTGGTTCAGGTTGGCACACCCCATGAGCTTTACACACGACCCGAATCAGCATTTGTCGCCGAGTTCATCGGTGGGACTAATCTATTACGCGGGACGTTGGAAGAGGTGGGTGACCTTTTGACGGTAAAAACCCAAGCCGGCATTGTGCGTGCGAAAAATGGTGTCAAGGGGTTGGGACGAGGCGAGCCGGTTTTTTGCTCGGTGCGGCCGGAATCCCTGCGATTAAAGCCGGCCGGGGAGTCAAGTGGTATACCATCATCCGATTTAACCAACGAGTTGATCGGCGAGGTGCAAAGCATGATGTACCTCGGCGACAACGAACAATACTCCTTGCGTCTCACGGACAGCGCCATAGTGCGTGCCGTGGAGTACAACCCGCCAACGAGGAAAACTAAGGTTGGAGACCGGCTCGCGCTGCAGTTCGATGTCCACGCTGTCGTCGTGTTGCACCAGGAGGAGTTGGGTGACTAG
PROTEIN sequence
Length: 368
MVSVKFESVSKILGQSRAVDNLTLDIGAEELFFLLGPSGCGKTTALRLVAGFYTPDDGRILFNGQDQSRVPPHKRNTGMVFQNYALWPHMDVRSNVAYGLKMRRVSEADKEKRVRHALEIVHMQAYAERIPNQLSGGQQQRVALARALVIEPDVVLLDEPLSNLDAKLRVEMRTQIKDIHRKIGRTMIYVTHDQAEALSMADRIAVMRRGQLVQVGTPHELYTRPESAFVAEFIGGTNLLRGTLEEVGDLLTVKTQAGIVRAKNGVKGLGRGEPVFCSVRPESLRLKPAGESSGIPSSDLTNELIGEVQSMMYLGDNEQYSLRLTDSAIVRAVEYNPPTRKTKVGDRLALQFDVHAVVVLHQEELGD*