ggKbase home page

PLM1_100_b1_sep16_scaffold_13960_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1357..2337

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 321.0
  • Bit_score: 224
  • Evalue 1.00e-55
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 309.0
  • Bit_score: 175
  • Evalue 1.60e-41
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 326.0
  • Bit_score: 418
  • Evalue 6.80e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGAGACCCGCCTTTTTACTCGCGATACTCCTGAATCTCATTTCGTTTTCTGAGAGCTTTGCTGCTGATCGGCTGCGGATCGCCTATAGCTCCATTAGCGGCGCTTACACCGGAATCTGGGTCGCTCATGACGCCGGCTTTTTCGCCAAAGAAGGTTTGGAAGATCAGATCATTCTCATCCCCAGCGCGACGCAGCTCGCGCAGGTAACCGTGGCCGGTGACGTGGACATCGCATCATTGGGCGGCGGGCCGGTCATGGCGGCGGTCTTGAGCGGCGCAGACTTGAAAATGATCGGCAACAACGTCAACAAACTCATTTTCTCGCTGCACACCAAGCCGGAGATAAAAAGCATCGAAGAGCTCCGCGGAAAACGCATCGCCGTCAGCCGTTTCGGATCCAGCTCCGATGTCGCCGCCCGTCACGCGCTGCGAAAATTCAGCCTCGATCCGCAAAAAGACATCACACTCATGCAGCTAGGCTCAATGTCGAACATGTTCGGCGCATTGAAATCGGGAGCCGTCGAGGCGTCTATGGTCTCTCCTCCAACGCAATTCTTATCCGAAAAGTTGGGCTTCAAAGAGCTGCTTAGCGTGACCGACATGGATCTGGCTTATCCGAACCCCGGCATGGCAGTTTCGGGTGACTTGATACGCAAAAAATCGGACATCATCGATCGTTTCATGCGCGCCTACGTGCGTGCCATTCATCGCGCCCGAACCGACCGAGACTCCACGATCAAGACACTGGCAAAATACACCACCGTTACAGACACTGTACTGCTCGGCAAGACCTACGATTTTTACATGAGCAAAGTGCTGGAGCGCGCTCCTTATATCAACATGCAAGGCATGCAGAACGCGCTGGATGACGTGGCGCGAACCGTCCCCGGCGCAAAGAACGTCAAGCCGGAACAGTTCGTCGATTTGCGATTTCTAGACCGGGTAGAAAAAAGCGGCGTGCTTAAGGAGCTCTACAAGTAA
PROTEIN sequence
Length: 327
MRPAFLLAILLNLISFSESFAADRLRIAYSSISGAYTGIWVAHDAGFFAKEGLEDQIILIPSATQLAQVTVAGDVDIASLGGGPVMAAVLSGADLKMIGNNVNKLIFSLHTKPEIKSIEELRGKRIAVSRFGSSSDVAARHALRKFSLDPQKDITLMQLGSMSNMFGALKSGAVEASMVSPPTQFLSEKLGFKELLSVTDMDLAYPNPGMAVSGDLIRKKSDIIDRFMRAYVRAIHRARTDRDSTIKTLAKYTTVTDTVLLGKTYDFYMSKVLERAPYINMQGMQNALDDVARTVPGAKNVKPEQFVDLRFLDRVEKSGVLKELYK*