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PLM1_100_b1_sep16_scaffold_15478_1

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3..425

Top 3 Functional Annotations

Value Algorithm Source
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 131.0
  • Bit_score: 147
  • Evalue 9.00e-33
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 139.0
  • Bit_score: 120
  • Evalue 3.30e-25
GGDEF domain-like protein {ECO:0000313|EMBL:ADP99567.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 139.0
  • Bit_score: 120
  • Evalue 1.70e-24

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Taxonomy

Marinobacter adhaerens → Marinobacter → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
CTCGACGCCGAGATCAAGCGTGCGCAGCGCACCGAGCGTCCGTTTGCGATTCTTTTCTTGGACTTGGACAAATTGAAGATCATCAACGATCGATCCGGCCATATTGCCGGCAACCAGGCGCTGTGCCGGGTTGCCAATGCGCTGCGCGGATCGTGCCGCGCCATCGACACGGTGGCACGTTTTGGCGGAGATGAGTTCGCCGCGATTCTGCCGGAAGCTGAAAAAGACGCTGCCCATCGAGTGGCGGAGCGAGTTGCCGCCCGGCTGGCCGCCGACCGTGACGGACCACCACTAACCGTGAGCGCCGGCGTCGCCGTATATCCGACGGATGGGGACAGAACGGAGTCTCTTATGAGCGCCGCGGATAGTGTTTTGTATGAGGCGAAACGGCGTGACCGTCCGGAGAGGCCGAAGAGCTTGTGA
PROTEIN sequence
Length: 141
LDAEIKRAQRTERPFAILFLDLDKLKIINDRSGHIAGNQALCRVANALRGSCRAIDTVARFGGDEFAAILPEAEKDAAHRVAERVAARLAADRDGPPLTVSAGVAVYPTDGDRTESLMSAADSVLYEAKRRDRPERPKSL*