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PLM1_100_b1_sep16_scaffold_17728_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2992..3849)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase {ECO:0000313|EMBL:KDP88743.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KDP88743.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 291.0
  • Bit_score: 283
  • Evalue 2.30e-73
ykoU2; ATP-dependent DNA ligase YkoU (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 300.0
  • Bit_score: 275
  • Evalue 9.70e-72
DNA ligase D bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 283.0
  • Bit_score: 278
  • Evalue 5.30e-72

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
TCAACGCCGGAACCCCGCGGTAAAATCGCAGGTAATGGAAAAAATCTAAGCTTCGTCGTGCAGAAGCACGCGGCGCGCCGGCTTCATTACGATTTCCGTTTGGAAATCGGCGGTGTTTTGGCAAGCTGGGCGATTCCGAAAGGACCGAGCCTCGACCCGAAGGAGCGCCGTCTAGCGGTCCACGTCGAAGATCACCCTCTCGAATATGGCAAGTTTGAGGGTATCATCCCCAAGGGGCATTATGGGGCAGGATCAGTTGAGCTATGGGATCGCGGCACTTGGACTCCCAACAGCAATCCACGCGCGGGATTGCAACAAGGCAAGCTCAAATTTCATCTCAACGGCAAAAGATTGTCCGGCGGCTGGAGCTTGGTTCGCATGGGCAGGCGAAACCAGGAGCGGGGTAAGGATAACTGGCTACTTATCAAAGAGCGCGACGACGCGGCTGCGAACAACGGTCGTGTCGTGGAGCGTAAAAAGAGCGTGACAACGACGCGGTTGATTCGAGGTAGCCGGACGGGGAATTTGCCAGTGGACGCCAAAAAAACTCATCGCCGCGGCAGCCGACAAGTGGTTCGAATCGAAGCATCTTTGGATAAAGCCAAAAAAGCAGCGCTGCCGACTTTTGTTTGGCCGCAGTTAGCCACACTCGTCGATACGGTGCCCCAGGGCGAAGAGTGGCTGCATGAGATTAAATTCGACGGCTATCGTGTCCTGTGCCGGATCAAAAATCGCCACGTATCGTTTTTGACGCGCGAAGGCAACGATTGGACGCGCCAGTTCAGTTTTTTGATCGAGCCTGTCGCGGCGCTACCCCTGCGACAGGGACTGATTTCCAATTGCTGCAAAATTCTTTGA
PROTEIN sequence
Length: 286
STPEPRGKIAGNGKNLSFVVQKHAARRLHYDFRLEIGGVLASWAIPKGPSLDPKERRLAVHVEDHPLEYGKFEGIIPKGHYGAGSVELWDRGTWTPNSNPRAGLQQGKLKFHLNGKRLSGGWSLVRMGRRNQERGKDNWLLIKERDDAAANNGRVVERKKSVTTTRLIRGSRTGNLPVDAKKTHRRGSRQVVRIEASLDKAKKAALPTFVWPQLATLVDTVPQGEEWLHEIKFDGYRVLCRIKNRHVSFLTREGNDWTRQFSFLIEPVAALPLRQGLISNCCKIL*