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PLM1_100_b1_sep16_scaffold_17854_2

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1121..1978)

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 285.0
  • Bit_score: 401
  • Evalue 5.40e-109
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH82822.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 286.0
  • Bit_score: 359
  • Evalue 3.30e-96
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 290.0
  • Bit_score: 342
  • Evalue 8.40e-92

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Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 858
ATGCTCGGTTCGCGGAGCGAGGCGGACGACGCCGTTCAGGAAGCCTGGCTGCGCCTCAGCCGCTCCGATACAAGCAGTGTCGAGAACCTGGGCGGATGGCTGACGACGGTCGTCGCGCGGGTGTGTCTAGACCTGCTGCGCTCGCGCAAGGCGCGGCCCGAGGATCCGCTGGGCGCGCACGAGCCCGACCCGATCGTGAACCCCGAGGACGGGATCGATCCCGAGCACGAAGCGCTACTGGCCGAAGTCGACGAGAACCGGCTTGACGTCGACCCCGAGCACGAAGTGCTCCTGGCAGAATCGGTCGGTCTCGCGCTCCTCGTGGTACTCGAAACGCTGGCTCCCGCCGAGCGGGTCGCGTTCGTGCTGCACGACATCTTCGACCTGCCCTTCGACGAGATCGCTTTCATCGTGGGCCGCTCCCCGACCGCGGCAAGGCAGCTCGCGAGCCGCGCACGCCGCCGGGTACAGGGAGCGGCCACGGTTCCCGACGCCGATCTCACCCGCCAGCGAGTAGTTGTCGACGCCTTCCTCGCTGCCTCGCGCGGCGGTGACTTCGACGCGCTTCTCGCGGTGCTCGACCCTGACGTCGTGCTCCGAGCCGACCGCGCAGCCGTGCAGGCGGGCGCATCGAGCGAGGTCCGCGGTGCGGCGGCCGTGGCCAAGACCTTCTCGGGGCGTGCCCGGGCCGCACAACCGGCGCTCGTGAACGGAGCCGTGGGAGCCGTGTGGGCTCCAGGCGGACGGCCGCGTGTTGTATTCGGCTTCACGATCACGCGCGGGAAGATCGTCGAAATCGACATGCTCGCCGACCCCGAGCGCCTTCGCCAGCTCGACCTGGCTGTCCTCAACGACTGA
PROTEIN sequence
Length: 286
MLGSRSEADDAVQEAWLRLSRSDTSSVENLGGWLTTVVARVCLDLLRSRKARPEDPLGAHEPDPIVNPEDGIDPEHEALLAEVDENRLDVDPEHEVLLAESVGLALLVVLETLAPAERVAFVLHDIFDLPFDEIAFIVGRSPTAARQLASRARRRVQGAATVPDADLTRQRVVVDAFLAASRGGDFDALLAVLDPDVVLRADRAAVQAGASSEVRGAAAVAKTFSGRARAAQPALVNGAVGAVWAPGGRPRVVFGFTITRGKIVEIDMLADPERLRQLDLAVLND*