ggKbase home page

PLM1_100_b1_sep16_scaffold_18187_2

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2127..2450

Top 3 Functional Annotations

Value Algorithm Source
Rieske (2Fe-2S) type ferredoxin similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 101.0
  • Bit_score: 65
  • Evalue 9.70e-09
Rieske (2Fe-2S) region; K05710 ferredoxin subunit of phenylpropionate dioxygenase bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 98.0
  • Bit_score: 58
  • Evalue 3.20e-06
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 107.0
  • Bit_score: 143
  • Evalue 1.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGGGGTAAGCTATATTCCCGTTGCTCGCGTTGGCGAATTGTCTGCAGGCGCCATGAAAGAAGTCGACCTCGGCGGACGCCAAGTGCTCTTGGCGTTCGTCGAGGGAAAATATTTCGCCTTTTCCCGAACCTGTCCCCACGAAGAAGCCGATCTCAAGATTGCCGGCCAGCTCTTAGGCGGCGCAACGATTCGCTGCACCAATCACAGTTACTGTTACGATCTCGCGTCCGGCGAGTGCACCTTGCCAAAGGGAGCGGCGCCATTGACGGTGCTACCGGCCGAAGAACGCGGCGAAGAGGTTTGCATTCGCCTCGAATGGTAA
PROTEIN sequence
Length: 108
MGVSYIPVARVGELSAGAMKEVDLGGRQVLLAFVEGKYFAFSRTCPHEEADLKIAGQLLGGATIRCTNHSYCYDLASGECTLPKGAAPLTVLPAEERGEEVCIRLEW*