ggKbase home page

PLM1_100_b1_sep16_scaffold_19823_1

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3..911

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 303.0
  • Bit_score: 203
  • Evalue 2.30e-49
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 287.0
  • Bit_score: 164
  • Evalue 2.50e-38
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 302.0
  • Bit_score: 445
  • Evalue 4.80e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
GCGGTCCTGGCCTTCGGCTCCACGGGACCGAACCTGACGCCGTTCTGGGTAGCTCGCGAAGCCGGCCTGTACCGGCAGTATGGTCTCGACGTCGATGTGGTGTTTTTTCGCGGCAGCACCATCGCGATCAACGCGCTGGCGACTAAGGATGCTCACTTCGGCGCGTTCGGCGCGAGCTCTTCAGTGCTCGCCAAACTCGGCGGTATGGACACCGTGCTGATCGCCACGGCGACTCCCGGTTTGTTGTTTTATCTCGTGACCAAAAAGGAAATCAGGAATGCCAACGATCTGAAGGGAAAGAAAATCGGCGCCAGCCGGCCCGGTACGGATTCAGATCTGGCTGCGCGCGTCGCGGTTCAGAAACTCGGACTGTCCGAGAAGGATGTCAGCATCATCAGCATGGGCACGGACACCGAGCGGTTGTCGGCGATGACTCAGGGAGTCGCCGATGCCACCGTGGTAACCATCGGCGGTTACGTCGCGGCGCAAAAACTGGGCTTTCATTCGTTGATCGATTTGTCCCAAGCCAACGTCGCCTATGAGGCGGCGTCGATGATCACAACGCGGACGCTCATTAAAGAGAATCCCGAAATGGTCGGCAAATTTGTCAAGGGCTTTGTCGCCGCGATTCAATACGCCCAAACCCACCGGGAGTTTACGCTGAAAGTTCTCAGCAAATACATGCGCACCGCGGACCAGGAGATTCTCAACGCGAGTTACGATTATTACGTCGGCCGGATTATCCCGCGCACGCCCTACGTCAGCGAAAAAGGACTGCAAGCGGTGATCGATTTCATCCGCCAACGCAATCCCCAGACGCCGAACGTAAAAGCTCAGGACTTCATGGATAACCGCTTCATCAAAGAGCTGGACGAGAGCGGATTTATCAAGTCGCTGTATGCCAAGTAA
PROTEIN sequence
Length: 303
AVLAFGSTGPNLTPFWVAREAGLYRQYGLDVDVVFFRGSTIAINALATKDAHFGAFGASSSVLAKLGGMDTVLIATATPGLLFYLVTKKEIRNANDLKGKKIGASRPGTDSDLAARVAVQKLGLSEKDVSIISMGTDTERLSAMTQGVADATVVTIGGYVAAQKLGFHSLIDLSQANVAYEAASMITTRTLIKENPEMVGKFVKGFVAAIQYAQTHREFTLKVLSKYMRTADQEILNASYDYYVGRIIPRTPYVSEKGLQAVIDFIRQRNPQTPNVKAQDFMDNRFIKELDESGFIKSLYAK*