ggKbase home page

PLM1_100_b1_sep16_scaffold_21619_4

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2215..3021)

Top 3 Functional Annotations

Value Algorithm Source
4Fe-4S ferredoxin iron-sulfur binding domain protein bin=GWC2_Methylomirabilis_70_16 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 250.0
  • Bit_score: 289
  • Evalue 2.80e-75
formate dehydrogenase, nitrate-inducible, iron-sulfur subunit similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 216.0
  • Bit_score: 169
  • Evalue 1.20e-39
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 198.0
  • Bit_score: 345
  • Evalue 6.00e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGCAAAGAATCCGACCGAGACCTTGACTCAGCAATACGGCAACCTCGTGCCGACAGGACGGCTCAAGGACGGCAAGCCGCGAAGCATTTTGTTCGACGCGACCAAATGCATCGGCTGCCGCCACTGCGTGCAGGCGTGCAAAGATTGGAACGACCATGACCGCACCAGTCTTTATAAACTTTCCAGTACTACTTGGATCACCATGGAGCCGCCGGTCCTCGAGGGGCTCTCGCCGCTCTGGGCGCGCAATAGTTGCATGCACTGTAGTTTCGCCGCCTGCGCCGCGGTTTGCCCGGTAGAAGCGATCACGAAATACGAAGAAGGCCCGGTCGTCATCAACAAAGATGTCTGCATCGGCTGCGAATACTGTATCCATGCCTGTCCATGGGAAGTCATCACAAAAGACGAGATCACCGGCAAAGCGAGCAAGTGCACTATGTGCAGCGATCGCATTAGCGAGGACAAACAACCCTTCTGTGTCCAGGCCTGCCCGGTGAACGCGCTCGATTTCGGATTCTCTGAAGAGATTTCGGACAAGGCTAAGAAGCAGGCCGAAGCCGTAGGCGGTTACACTTACGGCGAAAGAGAAGCCGGCGGCGGCAATGTCGTCTACGTGCTAAAAGAGAGCAAAGAGAAATACGGCGTGCGCGACATTGGCGAAGAGAAGTTTCCCAAGCACAAAATTCCCCTCGGCCTGATGCTCAAAGATCTCTTCACGCCGCGCTGTGGTATTCCTGGCAAGTTGCGCGCGCTTTATCTGGCCATCATTCACCCGAAGCGACTTATTTATCGGTATTTCTCGTGA
PROTEIN sequence
Length: 269
MAKNPTETLTQQYGNLVPTGRLKDGKPRSILFDATKCIGCRHCVQACKDWNDHDRTSLYKLSSTTWITMEPPVLEGLSPLWARNSCMHCSFAACAAVCPVEAITKYEEGPVVINKDVCIGCEYCIHACPWEVITKDEITGKASKCTMCSDRISEDKQPFCVQACPVNALDFGFSEEISDKAKKQAEAVGGYTYGEREAGGGNVVYVLKESKEKYGVRDIGEEKFPKHKIPLGLMLKDLFTPRCGIPGKLRALYLAIIHPKRLIYRYFS*