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PLM1_100_b1_sep16_scaffold_21974_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1327..2556

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription regulator containing HTH domain Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RNK1_SYNP3 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 399.0
  • Bit_score: 416
  • Evalue 2.30e-113
Helix-turn-helix motif {ECO:0000313|EMBL:KGA93423.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 403.0
  • Bit_score: 653
  • Evalue 1.60e-184
putative transcription regulator containing HTH domain similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 399.0
  • Bit_score: 416
  • Evalue 6.60e-114

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Taxonomy

Leptospirillum ferriphilum → Leptospirillum → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAGTAATATTCGAGCGATTCGAAGCGAGGCAGATTACGAGGCCGCTATCGCGCGTATTGATGACCTTATGGACGCCGAGGGTGGTACCCCTGAGGGTGAGGAACTCGATGTGCTTACTGACCTTGTCGAACTTTACGAGGCAAAGCATGTCCCCATGGGTTTTCCGAGCCCGCTTGGAGCTATCCGGTTTCGCATGGAGCAAGGTGGGCTTTCACCGCGTGATCTTATCCCGTTCATGGGCAGCCGTGCAAAAGTATCCGAGGTACTGTCCGGCAAGCGCCCACTAACGATGCAAATGGCGCGCGCGCTACATGCCAATCTCGGTATCCCCGCTGACGTGCTGTTACAGCAACCGGGCGGTGAGTTGCATTCGGCGCTCGAAGGTACCGAGTGGCACCGGTTTCCGTTGGCAGAAATGGCAAAACGTGGATGGATCGAGAAGCGACGCAATCTTGACTCCCATGCCGAAGAAATTATGCGTGATCTGATTGGTCGGGCCGGAGGCGAATACGTTTTGCCTGCCGCGTTCTTCCGGAAGAATGATCAGGCGCGTGTCAACGCGAAAACTGACCCATACTCTCTCAAAGCTTGGTGCTGGGAAGTGTTAGCGAGGGCGAATGCGCACCGGCTGCCTGTCAGCTTTAAACCGGGCACGGTCGATCTCACTTTCCTGCGGAAAGTGGCCACATTGAGCTGGTCGCAAGACGGTCCCCGACTCGCTCAAGAATTCCTCGCTAATCACGGTATTCATCTCGTATATCTTGAACATCTATCACGTACGCACCTAGACGGTGCGGCGCTTCAACTCGCCGACGGCACACCCGTTATTGGACTGACCTTACGCTATGATCGGCTCGATAACTTCTGGTTCTGCTTGCTGCACGAGCTTGCTCATATCGGCCGCCATATGAGCGGGACTAACAATGAAGCATTTGTCGATGATCTGAGTCTTCGTGACGTGCACGCCGCGCGACGTGATCCGCGAGAAACCGAAGCGGATGAATGGGCCGAGAATGGGCTCATTCCAGAAGACGTATGGAATACGAGCAAGGTAAAGGACAACCCAACGCCGCTGGCCGTCATGGAGCTAGCGCAGCGCCTCGGCATTCATCCGGCCATCATTGCCGGTCGCATCCGATACGAGACACGGAACTTTCGCCTGTTGTCCCATTTTGTCGGAACCGGCACGTTACGTAAGCAGTTTTTGAAGAAGAAAAGCGATGGGTAA
PROTEIN sequence
Length: 410
MSNIRAIRSEADYEAAIARIDDLMDAEGGTPEGEELDVLTDLVELYEAKHVPMGFPSPLGAIRFRMEQGGLSPRDLIPFMGSRAKVSEVLSGKRPLTMQMARALHANLGIPADVLLQQPGGELHSALEGTEWHRFPLAEMAKRGWIEKRRNLDSHAEEIMRDLIGRAGGEYVLPAAFFRKNDQARVNAKTDPYSLKAWCWEVLARANAHRLPVSFKPGTVDLTFLRKVATLSWSQDGPRLAQEFLANHGIHLVYLEHLSRTHLDGAALQLADGTPVIGLTLRYDRLDNFWFCLLHELAHIGRHMSGTNNEAFVDDLSLRDVHAARRDPRETEADEWAENGLIPEDVWNTSKVKDNPTPLAVMELAQRLGIHPAIIAGRIRYETRNFRLLSHFVGTGTLRKQFLKKKSDG*