ggKbase home page

PLM1_100_b1_sep16_scaffold_24606_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1514..1900)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase beta domain protein region Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGV8_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 112.0
  • Bit_score: 92
  • Evalue 1.80e-16
DNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 112.0
  • Bit_score: 92
  • Evalue 5.20e-17
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 115.0
  • Bit_score: 127
  • Evalue 1.20e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_PLX_64_10 → Bacteria

Sequences

DNA sequence
Length: 387
TTGAAGATCCGCAAAGCAAATTCCAAGCGCGTCAAAGCGAGAAACAATACTGAAGCCGCAGCTTCTCCAGTCACTCCAGGACTCTTGCGCGAGATCGCTCAAAAGGTCGTTCACGCGTTTCGCCCGAAGAATATCATCCTGTTCGGTTCCTACGCCTACGGCAAGCCCACATCCGATAGCGACCTTGATTTGCTGATCGTTATGGAGAGCCGAGACCGTCCGGCAGAAAGGATAAGAAAAGTCAGCGACCTTTTTGATCCCCGCCCACTTCCCATGGACTTCATTGTCCTCACCCCCGGCGAGATGCGGCAAAGACTTAGCGGTTTCGACCCTTTCCTTGAGGAAGTTCTCGAAAAGGGTCAGATGTTGTATGACTCGGAAACCTGA
PROTEIN sequence
Length: 129
LKIRKANSKRVKARNNTEAAASPVTPGLLREIAQKVVHAFRPKNIILFGSYAYGKPTSDSDLDLLIVMESRDRPAERIRKVSDLFDPRPLPMDFIVLTPGEMRQRLSGFDPFLEEVLEKGQMLYDSET*