ggKbase home page

PLM1_100_b1_sep16_scaffold_24753_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1391..2509)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type Fe3+ transport system periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 315.0
  • Bit_score: 175
  • Evalue 8.20e-41
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 351.0
  • Bit_score: 522
  • Evalue 2.90e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
CTTGACCTGCCTGCTAATGGGCGACCCCTATCATTTGTGGCGGTGGCGATTGCTTCAGCCTTCACTGCGATTGTGTCAGCCGCGGAAATACCTAAGTGGAAGGAAGAGTGGCAGCGGGTGGTGGAGGCGGCCAAGAAGGAAGGGCAGATTTCGCTGTACGGCGGGCAAGAAATCACTCATCCGGATATCATCGCGGCGTTCAACAAAGAGTATGCATTCATTAAGGTCACATCCGCCAGTGGTCGCGCCGCCGACATGATGACCCGGATCGTCGCGGAGCGGCGCGCGGATAAATATTTAGCTGACTTGACGGCCAGCGGGCCCAATGGGCCGCGCATGCTCTATCTTAACAAAATTCTCGATCCCATCGCGCCGGCATTTATACTTCCCGAGGTCACGGATACTTCGAAATGGTACGGCGGCAAACATTGGTACGCCGATCCGGAGAACAAATATATTTTCATGTTCGAAGGCACCATCGTGACGACCGGACTTTCGGTCAATTCCAAGCTTGTGAACCCGGACGAGATCAAATCGTACTGGGATTTATTGCAGCCGAAATGGAAGGGAAAACTGCTCGGCCAAGACCCGCGCGGCGCAGCGTTGCTGACGCCGGTGTTGATTCTCTACCATCGTTCGGGACTCGGCGCCGATTTCCTGCGGCGGTTTTACACGGAGATCGATATCACGCTGTTCCGCGACCGCCGACAGGGAACCAATTGGCTGGCGACCGGAAAGTTTCCGCTCTGTCACCTCTGCCGTGAGATCGATAAGGCGGCGAAGCAAGGTCTTCCGGTCGAAGACATTCCTCCGGAGAAATTGAAAGAAGGCGGGACGATCGGTGGCGGCGGCAGCAGTGTGTTGGCGTTGATCAACCGCGCACCGCATCCGAACGCGGCCAAGCTATTTATAAACTGGTATCTGTCGCGCGAAGGCCAGAGCGTTTGGCAAAAAGTGATGAACGTGAAGGAAGTCGAAGCGTCGGATTCGATGCGCATCGATATTCCCAAGGACGAAGTGTTGCCGGATGGCAAGCGGGTCGCGGGACGAGAATATCAGGTGATCGGTTTTCTCGACCCCGAGCCGGTGCAGAAATTGTTGCAGGAGATTTTGAAATAG
PROTEIN sequence
Length: 373
LDLPANGRPLSFVAVAIASAFTAIVSAAEIPKWKEEWQRVVEAAKKEGQISLYGGQEITHPDIIAAFNKEYAFIKVTSASGRAADMMTRIVAERRADKYLADLTASGPNGPRMLYLNKILDPIAPAFILPEVTDTSKWYGGKHWYADPENKYIFMFEGTIVTTGLSVNSKLVNPDEIKSYWDLLQPKWKGKLLGQDPRGAALLTPVLILYHRSGLGADFLRRFYTEIDITLFRDRRQGTNWLATGKFPLCHLCREIDKAAKQGLPVEDIPPEKLKEGGTIGGGGSSVLALINRAPHPNAAKLFINWYLSREGQSVWQKVMNVKEVEASDSMRIDIPKDEVLPDGKRVAGREYQVIGFLDPEPVQKLLQEILK*