ggKbase home page

PLM1_100_b1_sep16_scaffold_225_10

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(9891..10730)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 293.0
  • Bit_score: 251
  • Evalue 9.50e-64
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 280.0
  • Bit_score: 244
  • Evalue 2.30e-62
Formamidopyrimidine-DNA glycosylase Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S2K7_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 293.0
  • Bit_score: 251
  • Evalue 6.80e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubellimicrobium thermophilum → Rubellimicrobium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGCCCGAGCTACCCGAGGTCGAGACGATTCGGCAACGGCTCGCGCCGGCCCTGACCGGGCGCAGGTTCGAACGCGTCACGATCGGCGACCCAAGGCTGACGAGGCCTGAACCGCCCGAGCTTGTCGCCGCCGCCCTCGAGGGCGAGCAGGTGCGCGAGTTGGGCCGCCGTGGCAAGTATTTGGTTGTCGCTTTCGAGAGCGGGCGGCACCTCCTCGTTCATTTGCGCATGACGGGCTCGCTCCAGCATCCGGTGAGCGGCGGGCTCGCCGCCGATCCACACCGGCGAGCAGTTGTCAGGCTAGACGACGGGTCGGACGTCGCCTACCGCGACGTCCGCCGCTTTGGAACCTGGACGCTCCTCGAGCCGGGAGAGCTAGACGAGTATTTCGCTGCCCGGCGCCTCGGGAGCGAGCCCCTGGAGCGGAGCTTCACCAGCCGCGTGCTCGCACGCGCTTTCGCCGGTCGCAGGGCGCCGCTCAAAGCCGCGCTCCTCGACCAGCGCGCCGCGGCCGGGCTGGGGAACATCTACGTCGACGAGGCGCTCTGGCGGGCGCGCCTGCATCCGCTTCGGCCCGCGGGCGAGCTCGGGCAGCAAGAGCTCAAGGAGCTGCGCAAGGCGATCCGAGAGACCCTCGAGCTGGGAATCGCACGCCAGGGGGCGAGCCTCCGCGATTACCGGGACCCCTCGGGGCGACGCGGATCGATGCAGAACGACTTCCGGGTCTACGGTCGCGCGGGCGAACCTTGTCCTCGCTGTGGCGCGCCGATCGAGAAGATTCGCGTGGCCGGGCGGGGCACCTGGTACTGCCCTCGCTGTCAGCAGCGCGAGCCCGGCTAG
PROTEIN sequence
Length: 280
MPELPEVETIRQRLAPALTGRRFERVTIGDPRLTRPEPPELVAAALEGEQVRELGRRGKYLVVAFESGRHLLVHLRMTGSLQHPVSGGLAADPHRRAVVRLDDGSDVAYRDVRRFGTWTLLEPGELDEYFAARRLGSEPLERSFTSRVLARAFAGRRAPLKAALLDQRAAAGLGNIYVDEALWRARLHPLRPAGELGQQELKELRKAIRETLELGIARQGASLRDYRDPSGRRGSMQNDFRVYGRAGEPCPRCGAPIEKIRVAGRGTWYCPRCQQREPG*