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PLM1_100_b1_sep16_scaffold_1313_7

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(4190..5017)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTD8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 251.0
  • Bit_score: 144
  • Evalue 8.80e-32
AraC family transcriptional regulator {ECO:0000313|EMBL:EIM02730.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 251.0
  • Bit_score: 144
  • Evalue 1.20e-31
Helix-turn-helix, AraC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 254.0
  • Bit_score: 142
  • Evalue 9.40e-32

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGGCATGACGGCGACGACGATCGTCGAGGACGGCGTGCGCGTGACCATGGGGCGCGCGGGCCGGTTCCAGTTCCGGCACATCGTCTTCCCGGCCTCGTCCTTCCTGCCTGCCTTCGAGCCGGAGGTGCCCTACGTCGTCGTCGTCCTCGACGGCGCGATGGACAAGATCTTCGCGCGGACGACCCAGACCCTGGGCGCGGCCAGCGTCGTCACGATGCCGGCCGGCGCGCGCCACGCGACACGCTTCGGCCGTACCGGCACGACCGTGCTCCTGCTCCTGCCGGCAGAGGAAGAGGGGCCAAGCCTAAGCGATTGGAACGGAATCGTGGCCGGCCTGCGGCACGTCCACGACGGTCGGCTTACGGGGCTCGGCTGGCGGGTGGCCGGGGAGCTTGCGGCCTCGGACTCGGTGTCCCGGCTCGCGGCCGAAGGCTACGGCCTGGAGCTCGTCTCCGACCTCATGCGCGGCGCCGACGAAGGCCGTCCCGCAGGCAGGCCGCCGGCCTGGCTCGCCGCCGTACGGGAACGCCTGCACGAGATCCCGGGAAACGCGCCGGCGCTCGGCGAGCTGGCGATCGAGGTCGGCGTCCATCCAAGCCACCTCGCCCGGGTCTTCCGCCGGCACCACGGAACGTCGATCGGCGCCTACGCGCGGCGACTCCGGCTCGACTGGGCGACGGCTCAGCTTGCGGCCGGCGAGACCTGCCTCGCGCTTCTCGCCGCCGAGGCAGGCTTCGCCGACCAGAGCCACTTCACGCGCGCGTTCAAGCGCCACACCGGCCTGACACCGGCCCGCTACCGCTCCGCCGTGCGTCGAGACTGCTAG
PROTEIN sequence
Length: 276
MGMTATTIVEDGVRVTMGRAGRFQFRHIVFPASSFLPAFEPEVPYVVVVLDGAMDKIFARTTQTLGAASVVTMPAGARHATRFGRTGTTVLLLLPAEEEGPSLSDWNGIVAGLRHVHDGRLTGLGWRVAGELAASDSVSRLAAEGYGLELVSDLMRGADEGRPAGRPPAWLAAVRERLHEIPGNAPALGELAIEVGVHPSHLARVFRRHHGTSIGAYARRLRLDWATAQLAAGETCLALLAAEAGFADQSHFTRAFKRHTGLTPARYRSAVRRDC*