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PLM1_100_b1_sep16_scaffold_35_9

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(7270..7743)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein Tax=Micromonospora RepID=D9T5S2_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 155.0
  • Bit_score: 229
  • Evalue 1.20e-57
Putative transcriptional regulator {ECO:0000313|EMBL:EXG81330.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 157.0
  • Bit_score: 282
  • Evalue 3.70e-73
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 155.0
  • Bit_score: 229
  • Evalue 3.30e-58

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGTCCGACTACGCCAAGGCGCTCGGCGCACGACTGCGCGCTATCCGGCAGCAACAGGGCCTGTCCCTGCAGGGCGTGGAGGAGAAGTCCGGCGGGCGGTGGAAAGCCGTCGTGGTCGGCTCCTACGAGCGCGGCGACCGCGCGGTCACGGTGGCCCGCCTCAACGAGCTCGCCGACTTCTACCGGGTACCGATCGCCGAACTGCTTCCCGGTGAGGGCCCCGGCCGGCACGAGGGCGCCAGCAAGGTCGTCATCGACCTGGAACGGCTCGCCCACCTGCCCGGCGACGAGATCGGGCCGGTCGTCCGGTTCGCGCGCAGCATCCAGCAGCAGCGCGGCGACTACAACGGCCGGGTCCTCTCGATCCGCGCCGTCGACCTCCAGGCGCTCGCGATCGTGTACGACCTCTCGCCCTCCGGCCTCATCGAGCGGCTCACCGAGTGGGGCGTGCTGGTCGCCACGCCCGTCCGCTAG
PROTEIN sequence
Length: 158
MSDYAKALGARLRAIRQQQGLSLQGVEEKSGGRWKAVVVGSYERGDRAVTVARLNELADFYRVPIAELLPGEGPGRHEGASKVVIDLERLAHLPGDEIGPVVRFARSIQQQRGDYNGRVLSIRAVDLQALAIVYDLSPSGLIERLTEWGVLVATPVR*