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PLM1_100_b1_sep16_scaffold_64_25

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(19499..20302)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S1I6_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 268.0
  • Bit_score: 350
  • Evalue 1.00e-93
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 268.0
  • Bit_score: 350
  • Evalue 2.90e-94
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 268.0
  • Bit_score: 350
  • Evalue 1.40e-93

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Taxonomy

Actinoplanes sp. SE50/110 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGACGGTGGTGCTCAGCGGAGCGAACCGTGCTGACGCGGAGCGGGTGACCCGGTTGCTCACTGCACCGGTGTGGCCTGCTGCGGAACCCGCTGAGGCGGCGCGGTCGGGCACCGCCAGGCGGCGGGGCGTATCCTCGGCGAGCGGCCCTGTGCAACTCCGGGCCGGACGGACGGGAGACCTCTTGGCACGCGAGGAGACGGCGGAGCAGCGCAACGAGCGCTTCGAACGGGACGCACTCCCGTTCCTGGACCAGCTGTACGCCGCGGCGCTGCGGATGACGCGTAACCCTGCCGACGCCGAAGATCTTGTCCAGGAGACGTTCGTTAAGGCGTACGCCGCGTTCCACCAGTTCGAGGACGGCACCAACCTCAAGGCCTGGCTGTACCGGATCCTCACGAACACCTTCATCAACAACTACCGCAAGAAGCAGCGGCAGCCGCAGCAGAGCCCGACCGAGCAGATCGAGGACTGGCAGCTCGCGGCGGCGGCGGCGCACACCTCCACCGGCCTGCGTTCCGCCGAGGTGGAGGCGCTCGACCGCCTTCCCGACAGCGACATCAAGACCGCCCTCCAGGCGCTCCCGGAGGACTTCCGGCTCGCGGTCTACCTCGCCGACGTCGAGGGATTCGCCTACAAGGAGATCGCGGAGATCATGGGTACGCCGATCGGCACCGTGATGTCCCGGCTGCACCGCGGCCGGCGCAACCTCCGCCACATGTTGGAGCAGTACGCCATCGACCGTGGCATCCTTCGCCCGGACGATGTGCCGGCTGGCGCGGGCAGCCAGGAGGTGCCGTCGTGA
PROTEIN sequence
Length: 268
MTVVLSGANRADAERVTRLLTAPVWPAAEPAEAARSGTARRRGVSSASGPVQLRAGRTGDLLAREETAEQRNERFERDALPFLDQLYAAALRMTRNPADAEDLVQETFVKAYAAFHQFEDGTNLKAWLYRILTNTFINNYRKKQRQPQQSPTEQIEDWQLAAAAAHTSTGLRSAEVEALDRLPDSDIKTALQALPEDFRLAVYLADVEGFAYKEIAEIMGTPIGTVMSRLHRGRRNLRHMLEQYAIDRGILRPDDVPAGAGSQEVPS*