ggKbase home page

PLM1_100_b1_sep16_scaffold_46278_3

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1952..2719

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family Tax=Propionibacterium acidifaciens F0233 RepID=U2RJ11_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 228.0
  • Bit_score: 218
  • Evalue 7.60e-54
Transposase, IS4 family {ECO:0000313|EMBL:ERK58818.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidifaciens F0233.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 228.0
  • Bit_score: 218
  • Evalue 1.10e-53
transposase, IS4 family similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 250.0
  • Bit_score: 199
  • Evalue 1.00e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium acidifaciens → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
GTGCGTACCCATCGTACTATCGGACTGAGCCGGGCTCAATTCGACGAGCTTCTTCAGCGCGTCGGAGAACTCATCACTTGGGACAAAGGTGTCGGTCGCCCTCGGGGCCTGACATTGGCGCAGGGCCTCAAGGCGACCCTGATGTACTTCAAGAACAATGTCACCGAGGAGGTGATCGCGGAGCTGTTGTTCGTGAGCCAGTCGGTTATCTCGGAGACCATCTCCACTCTCGAAGATGTGATCGTGGAAGCGCTCCAAGACTTCGGGCCGGACCTGGCCGAGGCGGCCGAGGGGCTCGACGGGCGCGTGGCGGTGATCGACGGCTCGCTGCATCCGTGCTGGTCATGGAGGGGCGAGGAGGATCTGTGGTCAGGCAAGCACAAGGAGACCGGGCACCAGCACCAGTACGTGTGTGACCTCGCCGGGAACCTGAGGTACGTCTCCGATCCGCTCCCCGGGAAGACCCATGACGCCAAGGCGTTTCGGGACGACAGTCATTTCAACGAGTCCAACGCCTTCGCGGACAAGGGGTACGTCGGGTGCGGCGTCACCACGCCGTTCAAGAAGCCAGCCGGCGGCGAGCTGTTCGAATGGCACAAGGAATTCAACAAGACGGTCAACCAGTATCGATACGTCGTCGAGCGAGCGATCGCCAACTTCAAGACATGGCGCTGCATGCACACCGATTACCGTCGGCCACTTCGAACCTACCCGACCGCCTTCCGTGCCATTCGCTCACTTCACTTCTTCAAGCTGGGTTTCCGATAA
PROTEIN sequence
Length: 256
VRTHRTIGLSRAQFDELLQRVGELITWDKGVGRPRGLTLAQGLKATLMYFKNNVTEEVIAELLFVSQSVISETISTLEDVIVEALQDFGPDLAEAAEGLDGRVAVIDGSLHPCWSWRGEEDLWSGKHKETGHQHQYVCDLAGNLRYVSDPLPGKTHDAKAFRDDSHFNESNAFADKGYVGCGVTTPFKKPAGGELFEWHKEFNKTVNQYRYVVERAIANFKTWRCMHTDYRRPLRTYPTAFRAIRSLHFFKLGFR*