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PLM1_100_coex_sep16_scaffold_1093_11

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 7429..11631

Top 3 Functional Annotations

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Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 1367.0
  • Bit_score: 1824
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 1400.0
  • Bit_score: 2430
  • Evalue 0.0
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 1399.0
  • Bit_score: 2427
  • Evalue 0.0

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 4203
ATGCTGACGGACCGGCCTTTCGGCAGCCTGGTACGCGAGGACAAGCCTGCCAAGGACCTGTGGGGCATCCTGGACCGCCACCCGAAGCCGCTGAGCTTCGGGGCGATCCGTATCAAGCTCGCATCGCCGCAGAAGATCCGCGACTGGTCGCACGGGGAAGTCAAGAAGCCGGAGACCATCAACTACCGGACGTTCAAGCCGGAGCGCGACGGCCTGTTCTGCGCCCGCATCTTCGGCCCGACCAAGGACTACGAGTGCGCCTGCGGCAAGTACAAGCGCATGAAGTTCGCGGGCGTCATCTGCGACAAGTGCGGCGTCGAGGTCACCCGGGCCCGCGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCTCACCGGTCTCCCACGTCTGGTTCTTCAAGGGCCTGCCCTCGCGGATCGGGCAGCTCCTCGACATGTCGCTGCGCGAGCTGGAGAAGATCCTCTACTTCGAGGAGTACGTGGTGGTGGACCCCGGTCGGGTGCCCGGGCTCAAGAAGAAGGACCTGCTGTCGGTGGACCGTGTCCGCAAGCTGACCGAGGAGCACGGCCACGAGGCGTTCTCCGCCGGCATGGGCGCGGAGGCCATCCGGGAGCTGCTGCGCGGCATGGACATGGACGTGCTGGCCCGCGAGCTGCGCGCCGGCATGGGGGTGGAGACGTCGGCCCAGAAGAAGAAGAAGATCGTCAAGCGCCTCAAGGTGGTGGAGGCGTTCCTCAAGTCCGGCAACCAGCCGGAGTGGATGATCCTCGAGGTCCTGCCGGTCATCCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCGACGGGGGCCGCTTCGCGACCTCGGACCTGAACGATCTCTACCGGCGCGTGATCAACCGCAACAATCGGCTCAAGCGCCTGATGGAGCTCCGCGCGCCCGAGATCATCATCCGCAACGAGAAGCGGATGCTGCAGGAGGCGGTGGACGCCCTCTTCGACAACGGGCGCCGGGGCCGGGTCATCACCGGGCCCAACAATCGCCCGCTGAAGTCCCTGTCCGACACGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGGGTGGACTACTCCGGGCGCTCGGTCATCGTGGTGGGCCCGTACCTCAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAGCTCTTCAAGCCGTTCATCCTCCGCAAGCTGGAGGAGCGGGGCATCGCCTCATCCATCAAGGCGGCCAAGAAGTACGTGGAGAAGGAGCGGCCCGAGGTGTGGGACATCCTGGAAGAGGTCATCCAGGAGCATCCGGTGCTGCTGAACCGGGCGCCCACGCTCCACCGCCTAGGCATCCAGGGCTTCGAGCCCATCCTGGTCGAGGGCAAGGCCATCGAGATCCATCCGCTCGTGTGCACGGCTTTCAACGCGGACTTCGACGGTGACCAGATGGCGGTGCACGTGCCGCTCTCCATGGAAGCCCAGATGGAGACGCAGGTGCTGATGCTGTCCGCCAACAATATCCTGTCGCCCTCCAACGGGGCGCCGGTGGCGGTGCCGACCCAGGACATGGTGTTCGGCATCTACTACATGACCAAGGAGCGCCCGGGGTCCAAGGGCGAGGGCCGGCTCTTCGCGGATTCGGAGGACCTCCGGATCGCCTACGACAACGAGGACGTGGACCTGCAGGCCCGCATCCGGCTGCGCTACAACGGCACCATCATCGAGACCACGGTCGGCCGCACCCTCTTCAACGAGGTGGTGCCGGAGCCGCTCCGGTTCCTCAACAAGGAGCTGAAGAAGAAGGAGATCGGCCAGCTGATCTCCGACTGCTACAACCGGCTCGGCAACGAGGCGACCGTCACCTTCCTCGACGAGCTGAAGGACGTCGGCTTCCGCTACGCGACCCTGTCCGGGCTCAGCATCGGCATCGTGGACATGCACGTGCCCTCGGCGAAGGGGGAGATCATCGGGCGCGCCCGTCAGAACGTCAACGAGGTGGAGCAGCAGTACCAGGACGGCGTCATCACCAACGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGCCCACGTGACCGAGCAGATCGCGGATCAGCTCTTCAAGGAGATGGAGGTGCGCGCCGACAACGGCGACTTCAACCCCATCTTCATGATGGCCGACTCCGGGGCGCGGGGCTCCAAGCAGCAGATCCGGCAGCTCGCGGGCATGCGTGGCCTCATGGCCAAGCCGAGCGGCGAGGTCATCGAGACGCCCATCACGTCGAACTTCCGCGAGGGCCTCACCGTCCTCGAATACTTCACGTCGACCCACGGCGCCCGCAAGGGCCTGGCCGACACCGCGCTGAAGACGGCGGACTCCGGCTACCTGACCCGCCGCCTGGTGGACGTGGCTCAGGACGTGATCATCTCCGAGTACGACTGCGGCACCGTGAAGTACATCGAGGCCTCGCCGCTCATCGAGGGCGGCGACATCATCCAGTCGCTCCGCGACCGGGTGCTGGGCCGGGTGGCCGCGGGCGACATCCGCGACCCCTACACCGGCGAGATCATCGTGCAGGCCAACTGCGAGATCGTGGAAGACCTGGCCCAGAAGATCGAAGATTCGGGCCTCGAGCGGGTCCGTATCCGGTCCGCGCTCACCTGCGAGTCCAAGCGCGGCATCTGCGTGATGTGCTACGGGCGTAACCTGGGCACCGGCAACCTGGCCGAGCTCGGGGAGGCGGTCGGCATCATCGCGGCCCAGTCCATCGGCGAGCCGGGCACCCAGCTCACGATGCGGACCTTCCACATCGGCGGCACCGCGAGCAAGGTCGTGGCCACCTCCCGGCACGACGCCAAGAACCCCGGCGTGTTGACCTACCACAATATCCGGTGGGTCGAGAACCGCGACGGCGAAGTGGTGGCCCTGAACCGAAACGGAGAAGTGATCCTGCACGACGAGAAGGGCCGCGAGAAGGAGCGGTATCCGGTCGTCCCCGGCGCCAAGATCAAGTTCCGGGACGGGGCCCGGGTGCCGAAGAGCGGCGTCACCATCGTGGAGTGGGACCCGTTCACGACCCCGATCCTCACCGAGGTGACGGGCACCATCGCCTTCCGGGACGTGGTGGACGAGGTCACGATCCGCGAAGAGATCGACGAGGTCACCGGTCTGGCCCAGCGGGTCATCATCGAGGATCCGGAGAACAAGCTGCAGCCGCGGGTGTCGGTGAAGGCCCCCGCCGGGAGCGCCGAGGCGCCGGGAGCGGTGGACGCGCTCGGTGAGACGCGTGGCCGCTACATGCTGCCGGTGGGTGCCTATCTCCTGGTGGCCGACGGAACCGACGTGCATGCGGGCGACATCATCGCCAAGATCCCGCGGGAGTCGACCAAGACCAAGGACATCACCGGCGGGCTGCCGCGGGTGGCCGAGCTGTTCGAGGCGCGCAAGCCCCGCGAGCAGGCGGTCATCACCGAGATCGACGGAGTGGTGGAGTTCGCCGGCTTCGTGAAGGGCATGCGGAAGATGATCATCCGCGCCGACGACAGCGAGACCAAGGAGTACCTGATCCCGAGCGGCAAGCACATCTCGGTCCGCGAAGGCGACCGGGTGAAGGCGGGCGAGGCCCTCATGGGCGGCTCGCCCAACCCACACGACTACCTGGCCGTGCTCGGCGACCGGGAGCTGCAGCGGTACCTCGTCAACGAGGTGCAGGAGGTCTACCGGCTGCAGGGTGTGACCATCAACGACAAGCACATCGAGATCATCGTGCGCCAGATGCTCCGGCGCGTGCGTATCGAGGAGGTCGGCGGCACCGAGTTCGTGGTGGGCGAGCTGGTCGACAAGTTCGTCTTCCAGGACGAGAACGACAAGGCGGTCGCGGCGGGCAAGGCGGCGGCCACCGCCCAGCCGGTCCTGCTGGGCATCACCAAGGCCTCCCTGTCCACCGACAGCTTCATCTCGGCCGCGTCCTTCCAGGAGACCACCCGGGTCCTGACCGAGGCCGCCATCAGCGGCAAGGTCGACGACCTGCGCGGGCTCAAGGAGAACGTGATCGTGGGCCGGCTCATCCCGGCCGGGACCGGGCTCAGCAACTACACCCGGGTGGAGGTCCTGAGCCAGGGCGGTGAGGAGGAGGCCCCGGTCGAGGTGGCGGCCGCGGCGCTCCCGGAGATGGCGGAGGCGGTGGACGGAGAAGACGACCCGGTCGCCGAGGCCGGGTAG
PROTEIN sequence
Length: 1401
MLTDRPFGSLVREDKPAKDLWGILDRHPKPLSFGAIRIKLASPQKIRDWSHGEVKKPETINYRTFKPERDGLFCARIFGPTKDYECACGKYKRMKFAGVICDKCGVEVTRARVRRERMGHIELASPVSHVWFFKGLPSRIGQLLDMSLRELEKILYFEEYVVVDPGRVPGLKKKDLLSVDRVRKLTEEHGHEAFSAGMGAEAIRELLRGMDMDVLARELRAGMGVETSAQKKKKIVKRLKVVEAFLKSGNQPEWMILEVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIIIRNEKRMLQEAVDALFDNGRRGRVITGPNNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKLHQCGLPKKMALELFKPFILRKLEERGIASSIKAAKKYVEKERPEVWDILEEVIQEHPVLLNRAPTLHRLGIQGFEPILVEGKAIEIHPLVCTAFNADFDGDQMAVHVPLSMEAQMETQVLMLSANNILSPSNGAPVAVPTQDMVFGIYYMTKERPGSKGEGRLFADSEDLRIAYDNEDVDLQARIRLRYNGTIIETTVGRTLFNEVVPEPLRFLNKELKKKEIGQLISDCYNRLGNEATVTFLDELKDVGFRYATLSGLSIGIVDMHVPSAKGEIIGRARQNVNEVEQQYQDGVITNGERYNKVVDIWAHVTEQIADQLFKEMEVRADNGDFNPIFMMADSGARGSKQQIRQLAGMRGLMAKPSGEVIETPITSNFREGLTVLEYFTSTHGARKGLADTALKTADSGYLTRRLVDVAQDVIISEYDCGTVKYIEASPLIEGGDIIQSLRDRVLGRVAAGDIRDPYTGEIIVQANCEIVEDLAQKIEDSGLERVRIRSALTCESKRGICVMCYGRNLGTGNLAELGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASKVVATSRHDAKNPGVLTYHNIRWVENRDGEVVALNRNGEVILHDEKGREKERYPVVPGAKIKFRDGARVPKSGVTIVEWDPFTTPILTEVTGTIAFRDVVDEVTIREEIDEVTGLAQRVIIEDPENKLQPRVSVKAPAGSAEAPGAVDALGETRGRYMLPVGAYLLVADGTDVHAGDIIAKIPRESTKTKDITGGLPRVAELFEARKPREQAVITEIDGVVEFAGFVKGMRKMIIRADDSETKEYLIPSGKHISVREGDRVKAGEALMGGSPNPHDYLAVLGDRELQRYLVNEVQEVYRLQGVTINDKHIEIIVRQMLRRVRIEEVGGTEFVVGELVDKFVFQDENDKAVAAGKAAATAQPVLLGITKASLSTDSFISAASFQETTRVLTEAAISGKVDDLRGLKENVIVGRLIPAGTGLSNYTRVEVLSQGGEEEAPVEVAAAALPEMAEAVDGEDDPVAEAG*