ggKbase home page

PLM1_100_coex_sep16_scaffold_30_16

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(16587..17825)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein releasing system, transmembrane protein, LolC/E family bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 410.0
  • Bit_score: 633
  • Evalue 9.30e-179
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 420.0
  • Bit_score: 368
  • Evalue 2.10e-99
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 410.0
  • Bit_score: 633
  • Evalue 1.30e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCTCCGGCGCATGCCCTTCGAGGTGTTCCTCGGGCTCCGCTACCTGCGGGCGCGCGGCCACCGGACCAACCTCTCGCTCTTCGTCTGGATCGGCATCGGGGGCGTCTTCCTCGGGGTGAGCGCGCTCATCGTGGTGCTCGCGGTGATGACCGGCTTCCAGGACGGCATCCGGGACAAGATCATCTCGGCCAACCCGCACGTGCTGATCATGGAAGCGGGCGGGCGCGGGGTGGCCGACGGCGGCGTCCTCGCCGAGCGGGTGGCCCCGGTCCACGGCGTCGTCTCCGCCACGCCCTTCGTGCTCCAGCAGGCGTTGTTCACCTCGCCGAGTGGAGGCGCCACCGGCGGGCTCCTGCGCGGGGTCGACCTCGCCACCCCGGCGGTGCGCGACGCGATCGCCTCCCAGGTCCGCTTCGGCAGCATCGAGCCCGTGCTCAAGGGGTCGGAGCCCGCCCTCCTCCTGGGCCGCGAGCTGGCGCGGAGCCTCGGGGTCGCGCCGGGCGACCACGTCACGGTGATCTCCCCGCAGGGGGCCATGACCGCGGTCGGGCTCGTGCCGAAGATGCGGCGCTTCCTGGTGGCCGGCTGGGTCGAGGTCGGCATGTACGAGTACGACGCCTCGCTCGCCTACACGTCATTGGCCTCGGCCCAGGAGTTCGCCGGCCTGGGCGACCGGGTGACGGGCGTGGAGGTGAAGCTCGCCAATCCCTTCGACGCCAAGGACGTGGGGCGGACCATCGCGGCCCGCCTCAAGGGCGCCTACTGGATTCGCGACTGGATGGACATGAACCGCAACCTCTTCGCGGCGCTCCAGCTCGAGAAGCTGGCCCTCTTCGTCATCGTCACCATCATCGTGCTGGTGGCGGCCTTCGCCATCATCGGCCACCTGGTCCTGCTGGTGGCCGAGAAGCGGAAGGAGATCGGGATCCTCAAGGCGATGGGGGCCGGGGCGGGGAGCATCGGGGCCGTGTTCCTGGTGGCCGGGATGCTGATCGGGGTGGGGGGCACCGTGGCGGGCAGCGCCTTCGGGCTGCTGCTGATCTGGGTGCAGAACACCTACAAGATCATCCGGCTGGCCAGCGACGTGTACCAGATCAGTCACCTGCCAATGAAGCTGACCGGCTCGGACTTCGCGATGATCGTGGGCTCTACTCTCGTCATCTCCTTCCTCGCGACCCTGTCGCCGGCCCGCCGGGCCGCGCGCATGGATCCGATCGAAGTGCTCCGCTATGAGTGA
PROTEIN sequence
Length: 413
MLRRMPFEVFLGLRYLRARGHRTNLSLFVWIGIGGVFLGVSALIVVLAVMTGFQDGIRDKIISANPHVLIMEAGGRGVADGGVLAERVAPVHGVVSATPFVLQQALFTSPSGGATGGLLRGVDLATPAVRDAIASQVRFGSIEPVLKGSEPALLLGRELARSLGVAPGDHVTVISPQGAMTAVGLVPKMRRFLVAGWVEVGMYEYDASLAYTSLASAQEFAGLGDRVTGVEVKLANPFDAKDVGRTIAARLKGAYWIRDWMDMNRNLFAALQLEKLALFVIVTIIVLVAAFAIIGHLVLLVAEKRKEIGILKAMGAGAGSIGAVFLVAGMLIGVGGTVAGSAFGLLLIWVQNTYKIIRLASDVYQISHLPMKLTGSDFAMIVGSTLVISFLATLSPARRAARMDPIEVLRYE*