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PLM1_100_coex_sep16_scaffold_1516_16

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(9657..10256)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EHR5_CHLL2 similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 167.0
  • Bit_score: 134
  • Evalue 8.60e-29
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 173.0
  • Bit_score: 134
  • Evalue 2.40e-29
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 178.0
  • Bit_score: 137
  • Evalue 1.40e-29

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Taxonomy

R_Nitrospinae_39_10 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 600
GTGGACAGCGCCGTCGAGTTTCAGGGTCTGGTGCTAGGTCATCTGGATTCGCTGTACAACTATGCGCTGGTCTTGACGCGGCGCACCGAGGACGCGGAAGACCTGCTGCAAGAGGTTCTCGTCCGCGGATTTCAGAGCTTCGCGACCTATGACCGGTCGCTGAGCTTCAAGGGCTGGATGTTCACCATCATCAAGAACACATACATAGACCGATTCCGCCGCCAGCGGAGGCTGCCCCAGGAAGAACCGCTCTGGGCCACGCGGGGCGTCGAGGAGCCCGTCCTGTCCCTGGACAACCCGCTCTGCTCGGTGCCCCTGGCCCCGGAGGATCTCCTCCTGCGCCGGGAAGCCATCGAGCAGGTGCGGGAGGCGATTCGCCGCCTGCCCGAGGAGATGCGAGAGGTCGTGGAGCTGCGGGACGTGGAGGGTCTGGCCTACCGCGAGATCGCCCGCGTCATCAACCGACCCATCGGCACCGTGATGTCGCGGCTCTACCGCGGGCGAAACCTCCTGCGCACCTGCCTGGTGGAGCTGCGGCGGGCGGTGGAGCAGCCCCCCCGCGCGGCGGATCAGACGAGCAAGGCGCATGATCGACTGTAA
PROTEIN sequence
Length: 200
VDSAVEFQGLVLGHLDSLYNYALVLTRRTEDAEDLLQEVLVRGFQSFATYDRSLSFKGWMFTIIKNTYIDRFRRQRRLPQEEPLWATRGVEEPVLSLDNPLCSVPLAPEDLLLRREAIEQVREAIRRLPEEMREVVELRDVEGLAYREIARVINRPIGTVMSRLYRGRNLLRTCLVELRRAVEQPPRAADQTSKAHDRL*