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PLM1_100_coex_sep16_scaffold_381_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(2256..3800)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase Tax=Frankia sp. (strain EuI1c) RepID=E3J899_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 516.0
  • Bit_score: 706
  • Evalue 1.10e-200
AMP-dependent synthetase and ligase similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 516.0
  • Bit_score: 706
  • Evalue 3.10e-201
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADP83292.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 516.0
  • Bit_score: 706
  • Evalue 1.50e-200

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGATCGTTCCGCTCACGCTGGCCGACTTTCTCGAGCGCGCCGAGCTCGTCTACGGGCACCGCGAGGCGGTGGTGGACGAGCCCAATCCGCCCGGCGGGGGCCTCGGACGCGTCACCTACGCGCAGTTCGCCTCGATGGCGCGAAGCCAGGCCGCCGCCCTCGACGATCTCGGGGTCGGAGAGAACGACCGCGTCGCGATCGTCTCGCCGAACGCGGCGCGCTTCCTCATCAGCCTCTTCGGGGTCAGCGTGTTCGGGCGCGTGCTGGTGCCGGTGAACTTCCGGCTGAACGCCGAGGAGATTCGCTACATCATCGAGCACTCCGGCTCCTCGGTGCTGCTGGTGGACCCCGAGATGGACGAGCCCCTGCGCGATATCAAGGTCAAGCACCGCTTCGTGCTGGGTAGCGGCACCGATCGGCAGCTCTTCCTGCGTCAGGGGGCGACGCCGCGCCTGCGGGTCACCGACGAGAACGCCACCGTTTCCATCAACTACACCTCCGGCACCACCGCGCGGCCCAAGGGCGTCCAGCTCACCCACCGCAACTTCTGGCTCAACGCGGTCACGTTCGGCTGGCACCTGGCCATGACCGACCGGGACGTGTATCTCCACACCCTGCCCACCTTCCACTGCAATGGCTGGGGCATGCCCTACGCGGTCACCGCGATGGGGGTCCGCCACGTCATCATCCGGAAGATCGACGGCGAGGAGATCCTGCGTCGCGTGGAGAGCGAGGGAGTGACCCTCTTCAACTGCGCGCCGGCGGTCATCGCGGCGGTGCTCGACGCGGCCGCGGCCCGTCGCGGCAAGGGCGTGGCGGTGCCGGGGCGGGGGCGCGTGCGGGTGGTCATCGCGGGGGCGCCGCCGCCGACCAAGACCATCGAGCGGATCGAGACCGAGCTGGGCTGGGAGTTCATCCAGATCTACGGGCTCACCGAGACGGCGCCGCTGCTCACGATCAACCGCGCGCCGGCGGAATGGGACGGTCTCGACGCCGCGGAGCGCGCGAAGCGCCTCTCCCGCGCGGGCGTGCCCGCGATCGGCGTCCAGATGCGGGTGGACGGCGAGGGCGAGGTATGTGCGCGCTCGAACCACGTCTTCGAGGGCTACTGGAACCAGCCGGAGGAGACCGCCAAGGCCATCGACGACGGCTGGTTCCATACCGGCGACGGCGGCTACCGCGACGACGCCTACGTCGTCATCAGCGACCGCAAGAAGGACGTGATCATCACCGGCGGCGAGAACGTCTCGTCCATCGAGGTCGAGGACTGCCTGTTCCAGCACCCGGCCGTGGCCGAGGTGGCGGTGATCGGCGTCCCCGACGAGAAGTGGGGCGAGACCATCAAGGCGCTGGTCGTCCTCCGCCCCGGCGCCGCCGCCACCGAGCGCGACCTCATCGAGCACTGCCGCAGCCGCATGGCGCACTACAAGTGCCCGACCTCGATCGAGCTGCGCGACGCGCTCACGCGCACGGCGACCGGGAAGCTGCAGAAGTTCAAGCTGCGCGAGCCCTACTGGGCCGGCCGTCCGCGCCGCGTGAACTGA
PROTEIN sequence
Length: 515
MIVPLTLADFLERAELVYGHREAVVDEPNPPGGGLGRVTYAQFASMARSQAAALDDLGVGENDRVAIVSPNAARFLISLFGVSVFGRVLVPVNFRLNAEEIRYIIEHSGSSVLLVDPEMDEPLRDIKVKHRFVLGSGTDRQLFLRQGATPRLRVTDENATVSINYTSGTTARPKGVQLTHRNFWLNAVTFGWHLAMTDRDVYLHTLPTFHCNGWGMPYAVTAMGVRHVIIRKIDGEEILRRVESEGVTLFNCAPAVIAAVLDAAAARRGKGVAVPGRGRVRVVIAGAPPPTKTIERIETELGWEFIQIYGLTETAPLLTINRAPAEWDGLDAAERAKRLSRAGVPAIGVQMRVDGEGEVCARSNHVFEGYWNQPEETAKAIDDGWFHTGDGGYRDDAYVVISDRKKDVIITGGENVSSIEVEDCLFQHPAVAEVAVIGVPDEKWGETIKALVVLRPGAAATERDLIEHCRSRMAHYKCPTSIELRDALTRTATGKLQKFKLREPYWAGRPRRVN*