ggKbase home page

PLM1_100_coex_sep16_scaffold_395_10

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(8229..8726)

Top 3 Functional Annotations

Value Algorithm Source
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5) similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 159.0
  • Bit_score: 156
  • Evalue 6.50e-36
NADH-quinone oxidoreductase subunit C bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 165.0
  • Bit_score: 285
  • Evalue 1.90e-74
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 165.0
  • Bit_score: 285
  • Evalue 2.70e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGACGGCCACGCCATTCTGGCCCGGCTGCGCGAGCGCTGGGGCGCCCGCATCCTCGCGACCCACGACTACCGCGGCGATCACACCGCGGTGTTTGGCCGCGAGGGGATCGTGCCGGCCCTGACCTTCTGCCGGGACGACGCCGCCCTCGCCTTCGACATGCTGGTGGACCTCACCGCGGTGGACTACAGCCGCTTCCCGGGCCGCGAAGATGGGCCCCGCTTCGAGGTCGTCTACCATCTCTATTCCGTCGCGCACAACCATCGCGTCCGGCTGAAGGTCCCGGTGGAGCAGGATGATTCCGTTGTTCCCACCGCATCAGGCCTGTGGCCCATCGCCAACTGGCAGGAGCGCGAGGTGTGGGACATGTTCGGCATCCGCTTCGACGGCCACCCGGACCTGCGCCGGCTCCTGATGTACGAGGAGTTCGAGGGCCATCCCCTGCGCAAGGACTACCCGATCAATCGCCGCCAGCCCCTGATCGGGCCGAAGGTGTAG
PROTEIN sequence
Length: 166
MDGHAILARLRERWGARILATHDYRGDHTAVFGREGIVPALTFCRDDAALAFDMLVDLTAVDYSRFPGREDGPRFEVVYHLYSVAHNHRVRLKVPVEQDDSVVPTASGLWPIANWQEREVWDMFGIRFDGHPDLRRLLMYEEFEGHPLRKDYPINRRQPLIGPKV*