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PLM1_100_coex_sep16_scaffold_297_6

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(5634..6743)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 347.0
  • Bit_score: 480
  • Evalue 9.00e-133
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 205.0
  • Bit_score: 154
  • Evalue 5.50e-35
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 364.0
  • Bit_score: 496
  • Evalue 1.70e-137

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1110
GTGACGTCGCCCGATACCCCGTCCGGCTCGGCCGGTTCCGCCGGGCTCCCGGAGTCCCCCGGAATCGACGAGCGCGCGCTCATCCAGCGGTGCATCGCCGGAGAGGCGGTGGCGTTCGAGCCGCTGGTCGAGAAGTACCGTCAGCGGGTGTGGCGTCTGGCCTACCAGGTGTTGCACGACCGCGAGGAGGCGTGGGACGTGGCTCAAGAGGCGTTCGTGCGGGCGTTTCATTCATTGCCGTCTTTCCGCGGACAGTCGGCCTTCTACACCTGGCTCTTCCGCATCACCGTCAACGTGGCGACCGATCGGCACCGGCAGCGCGGCGCGCAGGCGCGCGCCTTCGGCCCGGAGCGGGTGACCGAGGAGGAATGGGCCCGCAGCACGCCCGATCCGGGCCGCGGGCCGGATCAGGAAGCGGCGCGGGCGGAGCAGCGCGAGCGCATCCGTCGGGCGCTCGATGCCTTGCCGCCCAAGGCCCGAACGATTATCATGCTCAGTGACGTCGAAGGCCTCTCGTACCGCGAGATCGCCGAGGTGCTGAACTGTCCGATCGGGACCGTGATGTCCAGGCTGCATAACGCGCGTAAGCGGCTCAAGGGGCTCCTGGGGCCGATGCTCGCCCTGATTGTCTGGCTCGCCCTGACCCTGGCCTGGGCCATCCCGGCTCAGGCCCAGCAGATCATCCGCTTCGGGGTCCGCATCATGGAGGCATCGAACACCCCCGCGCCCGAGGGACAGGGCGCCCTGAAGAACCCCGCGTCCCCCACGCCCGAGGCGGAAACCGACGAGCGCATGAAGCGCATTCTCCCGCGGCTGCGGACGCTCTTCCGCTACACCGACTACACCACGCTCGACCGCCAGCGCGTCGAGGGGCCGCTCGGCACCCAGCAGCGGTTCGCGGTACCGGGCGAGCGGTGGCTCGAGGTCACTCCCGACCAGCTCCAGGGCAACCACGTGCGGATGCGGGTGCGGCTCCTGCGGGGCGTGCATTCCGAGGTGAACGCGGCGATCCAGGCCGCGCCGGGCGCCCCCGCGGTGCTCGGGGGCCCGCCGTACGGCAACGGCGTGCTGATCATCATCCTCTGGGCCAATCCCAACCCCACTCCCTGA
PROTEIN sequence
Length: 370
VTSPDTPSGSAGSAGLPESPGIDERALIQRCIAGEAVAFEPLVEKYRQRVWRLAYQVLHDREEAWDVAQEAFVRAFHSLPSFRGQSAFYTWLFRITVNVATDRHRQRGAQARAFGPERVTEEEWARSTPDPGRGPDQEAARAEQRERIRRALDALPPKARTIIMLSDVEGLSYREIAEVLNCPIGTVMSRLHNARKRLKGLLGPMLALIVWLALTLAWAIPAQAQQIIRFGVRIMEASNTPAPEGQGALKNPASPTPEAETDERMKRILPRLRTLFRYTDYTTLDRQRVEGPLGTQQRFAVPGERWLEVTPDQLQGNHVRMRVRLLRGVHSEVNAAIQAAPGAPAVLGGPPYGNGVLIIILWANPNPTP*