ggKbase home page

PLM1_100_coex_sep16_scaffold_1193_4

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 4866..5390

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, Crp/Fnr family bin=GWA2_Elusimicrobia_66_18 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 165.0
  • Bit_score: 114
  • Evalue 1.00e-22
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 130.0
  • Bit_score: 99
  • Evalue 5.80e-19
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 170.0
  • Bit_score: 142
  • Evalue 3.00e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGTTCGAGCGGCCCCTGCCGCGATGGCTAGCCTGGGCGGCGGACCCTGAGCAGCTCCGCCGCGCGCCCTTTCTCGCGCGCTCGCCGCTCTTCGCCGGCCTGCCGCGCCGCCTCCTGGCCCGGCTGGCGACGCGGTTCTTCGAGAAGGTCTATCACCCGGGCGAGGTCGTCTTCGACGAGGGCGATCCGGGCCGGGCGCTCTTCGTCGTCGTCGAGGGCGCGGTGGAGATCACCCGGGCGACGGCGCAGGGTGCGTACGTCCTGAATACGCTCGGCCCCGGCGATGCCTTCGGCGAGCTCGCCCTCATCGACGACTTCCCGCGCTCGGCCACCGCGCGGGTCGCCACGCCGGGGCGGCTGCTCATCCTCTACAAGAGCGACTTCGATGCGCTCATGGACGGCAACTCTCGGATCGCCCTCGTGGTGCTGCGCAACCTCTCTCGACTGCTCGCCATCTACGCGCGGCGCAGGCCGGTGGTCGCGACCGAGCCGGGCCCGGGCCCGGAGAGGGCGGGCCCGCTGTGA
PROTEIN sequence
Length: 175
MFERPLPRWLAWAADPEQLRRAPFLARSPLFAGLPRRLLARLATRFFEKVYHPGEVVFDEGDPGRALFVVVEGAVEITRATAQGAYVLNTLGPGDAFGELALIDDFPRSATARVATPGRLLILYKSDFDALMDGNSRIALVVLRNLSRLLAIYARRRPVVATEPGPGPERAGPL*