ggKbase home page

PLM1_100_coex_sep16_scaffold_199_14

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(11762..12955)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L266_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 350.0
  • Bit_score: 221
  • Evalue 1.40e-54
PAS domain S-box protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 350.0
  • Bit_score: 221
  • Evalue 3.90e-55
Tax=RBG_16_Gammaproteobacteria_66_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 330.0
  • Bit_score: 255
  • Evalue 1.20e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gammaproteobacteria_66_13_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGCCGCCGGCACCCGCCGCCGCATTGCGGGCGCTTCGCGAGAGCGAGACGCGCTACCGAGTCCTGGCCGAGCAGTCGAGCCTCGGCATTGTCATCCACAAGGACTTCATCATTCGCTACGCGAACCCCGCGCTGGTCACCCTCTTCGGGTACGGGCGGATCGGGGAAGTCATCGGGCGGGATCTGAGGGGCGTCCTCGCGCCGTCCGATCGGCCGCGTGTCGACGGATACGTCACCGGCCGGCGACAGGGCGAGCCGGCGCCGCCGCGCTACCGCTGCCAGGCCGTTCGCAAGGACGGCACCCGTCTCTGGGTCGAGGTCACCGCTTCCCCGGTCGCCTGGGGCGGCGAGGCGGCGGTCCTGGCCACGGTGGCGGACGTCAGCGAGCGCAACCGCAGCGAGGAGCTGGCGGGTGACCAGACGCGCCTGGCCCAGATGATCGCGCGCGGCGCCCCGCTTCCCGACCTGCTCGACGCGCTGACGCGGATGATCGAAGGGCACTCCGACGGCATGCTCGCGTCCATCCTCCTGCTCGACCCGGACGGCGTGCATCTGCGGCACGGGGCCGCGCCGAGCCTGCCCGCCAGCTACACCAGCGCGATCGATGGGCTCGCCATCGGCCCCGACGTCGGCTCCTGCGGGTCGGCGGCCTACCTGGGTGAGCCGGTCGTGGTCTCGAAGATCGACACCGATGCCCGGTGGGTCCCCTTCCGGGAGCTCGCCCTGAGTCACGATCTCCGGGCGTGCTGGTCGACGCCCATCAAGTCGTCGGAGGGCCGCGTCCTCGGCACGCTCGCGCTCTACTATCGCGAGCCGCGAGAGCCCGGCCTCTGGGAGCTCACCCTCATCGAGGTGGCCACGCAGCTTGCCGCGATTGCGATCGAGCGGGAGGCCATCGCCCTGCGCTCGGTCGCGCACCTGGCGAACGCGGCCGCGCACGAGATCAACAATCCGCTGACCGTCATCCTGGGGCGCTTGAGCATGCTCGCGGACCGAGTACCCGCCCAGACCCCCGAGCACGAGTGGGTGAGCAGTGCCCTCAAGGCGGCGATCCGCATCCAGGGTGTCATCAGCCGGATGCACGAGATCACTCGACTCGAGTACATGCCGAACCGGGCCCAAGATCTCCCGCCGACGCTGGACATCCGCAAGTCGAGCCACGACAGCTCCGAAGCCCCGTCAGGAGGCGGATGA
PROTEIN sequence
Length: 398
MPPAPAAALRALRESETRYRVLAEQSSLGIVIHKDFIIRYANPALVTLFGYGRIGEVIGRDLRGVLAPSDRPRVDGYVTGRRQGEPAPPRYRCQAVRKDGTRLWVEVTASPVAWGGEAAVLATVADVSERNRSEELAGDQTRLAQMIARGAPLPDLLDALTRMIEGHSDGMLASILLLDPDGVHLRHGAAPSLPASYTSAIDGLAIGPDVGSCGSAAYLGEPVVVSKIDTDARWVPFRELALSHDLRACWSTPIKSSEGRVLGTLALYYREPREPGLWELTLIEVATQLAAIAIEREAIALRSVAHLANAAAHEINNPLTVILGRLSMLADRVPAQTPEHEWVSSALKAAIRIQGVISRMHEITRLEYMPNRAQDLPPTLDIRKSSHDSSEAPSGGG*