ggKbase home page

PLM1_100_coex_sep16_scaffold_482_17

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(18121..18444)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein bin=bin7_NC10_sister species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 107.0
  • Bit_score: 131
  • Evalue 5.10e-28
Membrane protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 101.0
  • Bit_score: 100
  • Evalue 1.60e-19
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 106.0
  • Bit_score: 160
  • Evalue 1.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 324
TGGACCGTGGGAACGCTGGACTCGCTGGAGCCGGTGGCGGGCGCGATCCGTGCCACGGACCTGCACGAGCGGGGACTCGTCGCCCACACGGCGATCTACGCGCCGGCCGGCCTGCGCCAGCCGGTCGAGCACGTGTGGCGCCGTGACGGGCGGATCATCAACGTGGTGCGGCTGACGCCCGTGCAGGGAGGGCGGCGCGAGGGCTTCCGCACCTTCTCGCGCAAGACCGCGTTTCCGTCCGACTCCGTCGGGCGCTGGAGCGTCGACGTCACCACCGAGTCCGGCCAGCTCATCGGACGGCTGCGTTTCCGGGTGGTGCCGTGA
PROTEIN sequence
Length: 108
WTVGTLDSLEPVAGAIRATDLHERGLVAHTAIYAPAGLRQPVEHVWRRDGRIINVVRLTPVQGGRREGFRTFSRKTAFPSDSVGRWSVDVTTESGQLIGRLRFRVVP*