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PLM1_100_coex_sep16_scaffold_2240_5

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3475..4416)

Top 3 Functional Annotations

Value Algorithm Source
putative type 2 secretion system protein bin=bin3_NC10 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 316.0
  • Bit_score: 317
  • Evalue 1.50e-83
pilus assembly protein TadB similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 320.0
  • Bit_score: 181
  • Evalue 2.70e-43
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 316.0
  • Bit_score: 317
  • Evalue 2.10e-83

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Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 942
ATGCTCCTCGGTGTCGCGGCGCTCGTGTTCTTCGTGATCGTCACGGTCGTCGTTGGGTTGTGGTGGGTCCACGCATCCGGCGCGAGTGTGCGGCGCCGGCTCACGCGTCACGTGGAGGACGGGGCACCCGAGCAACTACTCAGAAGCGACGTGGCGGCGAGCCAGCCCTTCTGGGAACGGCTGGTGCGAAAGAGCGACCTGGTCGGCCAGGTCGCGAGGCTCAGCGAGCAGGCCGGCTCGACGCGAAGGGCGAGCAATGTGCTCCTGATCGTGGCCTGCGTCGCCGTGGCCGGCGGCCTCGTCGGAGGGTGGCGCCTCGGTAGCGCGGGCGGCGCGGTGATCTCGGCCATCGTGGCCGGTGCGCTGCCCGTTCTCCGTCTCGTGCACAAGCGGCAGCGCCGACTGCAGCGCTTCCAGGAGCACTTCGCGGACGCGGTCGACATGATCTCCCGCTCGATCCGGGCCGGCAACGCCTTGAGCGCGGCGATCCAGCTGGTGGGCGAGGAGATGGCCGATCCGATCGGTCACGAGTTCCGCCACGTCACCGAGGAGATCCGCCTCGGCCTCGACCCGGGTGAAGCGTTGTTGCGGCTTCAGCAACGGGTTCCGACCGAAGACGTGGTGTTCTTCTGCACCGCCATCAGAATCCAGCGCGGCTCGGGCGGCAACCTGGCCGAGATCCTGGATCGGCTCAGCGACGTGATACGCAAGCGGTTCGAGCTCCTGAGTCACGCGCGCGTGCTGTCCACGCAGCAGCGGTACGCGGCGATCTTCGTCGGACTCAGCCCGGCGCTGTTCTCGCTCATCTTCTACTTCCTGTCGCCAGGATACTTCGACCCGCTGATCGAGTCCCCGATGGCCCCGACCCTGTTGGGGGCCGGACTCGCTCTCGAGCTGGTCGGCGCCCTGATCATCTGGCGGCTGGCGAAGATCAAGGTGTGA
PROTEIN sequence
Length: 314
MLLGVAALVFFVIVTVVVGLWWVHASGASVRRRLTRHVEDGAPEQLLRSDVAASQPFWERLVRKSDLVGQVARLSEQAGSTRRASNVLLIVACVAVAGGLVGGWRLGSAGGAVISAIVAGALPVLRLVHKRQRRLQRFQEHFADAVDMISRSIRAGNALSAAIQLVGEEMADPIGHEFRHVTEEIRLGLDPGEALLRLQQRVPTEDVVFFCTAIRIQRGSGGNLAEILDRLSDVIRKRFELLSHARVLSTQQRYAAIFVGLSPALFSLIFYFLSPGYFDPLIESPMAPTLLGAGLALELVGALIIWRLAKIKV*