ggKbase home page

PLM1_100_coex_sep16_scaffold_2330_4

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3042..4640)

Top 3 Functional Annotations

Value Algorithm Source
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 493.0
  • Bit_score: 226
  • Evalue 1.30e-56
Extracellular solute-binding protein, family 5 bin=GWC2_Syntrophus__56_31 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 523.0
  • Bit_score: 226
  • Evalue 4.40e-56
Tax=RBG_16_Acidobacteria_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 545.0
  • Bit_score: 271
  • Evalue 1.30e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_64_8_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAAGCGTCGGCGGTGGATCACAGCGTCGATCGTGACGGCGCTTCTGGGCGCGCTCGCAGTGGCGCCGGGGGCGGCGGCGCGACCGGAGGGGACGCTGACGGTGGCCGTGGCCACCTTCGGCAACGAGCGATGGCTGCCCCATCTGTATGTCGGGGCCGAGGACGTCGTCCTCAAGCCGCTGTGGGAAAACCTCCTGAGTCGAGACGCCAAGGGCGACCTCATCCCCATGCTGGCCGAGCGGTGGCAGGTCACGGACGGGGGTCGGACGTGGAAGTTTCACCTCCGCAAAGGAGTCCGCTTCCACAACGGGACGGAGCTCACGGCCGAAGACGTCAAGTTCACGTTCGCCTCCATCGCCCGGGATGGCTCGGCCAATTCCATGGCGCCGGAGTTCCGGACGATCAAGAGCATGGAGGTCGAAGGCCCCTACACGATCAGCCTGCGCTTCGACAAGCCGTTCGTGACGCTCGGCAACCGGGTCACCCAAGGATTGTTCGCCTCGGTCGCGTATATCCAGTCCAGGAAGCACATCGAGACCGCCGGCGAGCAGGGGGCGGAGCGTCAGCCGCTGGGGACGGGGCCCTGGAAGTTCGTGGAGCACGTCCGCGGCGACCGCATCGTCTACGAGGCGGTGGAGAACCACTGGCGGGCGGTGCCGCACTTCAAGCGGCTGGTGTTCCTGAAGGTGCCCGAGCCGGCGACCCGCATGGCCATGCTGCGGGCGGGCGGCGCCGACGTCATCGAGATCGGCGGCGAGTACCTGGACGAGCTGAAGAAGGTGGGCATCCGGACGCTCGTCATGCCCAACGTGGCGGCCGTGTGGGTCATCCTCGGCGGGCAATGGCCCACCAAGCCGAGCTACGACCCGAAGGTGCCGTGGGCGCAGCCCGACGCCGAACGCGCGAAGAAGGTGCGCTTGGCCCTCAACCTCGCGGTCGACAAGAAAGCCATCTTCGAGCGCGTGCTGGGCGGCGTCGGGACTCCTGTCGGAACCGTGAACTACTACCCCACGGACCCGTGGATCTCGGACGCCTTGCTGAAGCCGGTCCCCTACGACCCGCCGAAGGCGAAGGCGTTGCTCGCGGAGGCGGGCTATCCCAATGGCTTCGAGATCACGATGAATCTCACCGCCTGGCCCGGCCGAGGCTATCTGCCCGACGTCGGCGAGGCAGTGGCAACTTACTGGGAGAGGGTCGGTCTCAAGGTCAAGCGGCGGCCCGTGGACCGGGCCGTGTTCTCGGCGGATTTCCGGGCGCGGTCGTATGCGGGAGTGGCGCTGGCCTACGCCGGGCCGATCATCGCTCCGGAACCCTGGGAGCTGTTCGCGCGGATCGCCCAGACGAAGTCGGCGGTGCATCTGTTGGTGGAGCATCCCAAGCTGGACGCGTTCATCGACCGGCTGGCGACCGAGCCGAGCGCCGCCGAGCGCACGCGGATCATGCGCGAGGAGATGGGCCCGTGGCTTTATGACTACATGCCGGCCGTCAGCATCGGGGCGACGCACTCGATTGCCGGCGTGGGCCCCAAGGTGGGCGAATGGCCGTTGATCCCGGGGCACATGGGGATCCACAACTGGGAGTACGTGACGAGAAAGTAG
PROTEIN sequence
Length: 533
MKRRRWITASIVTALLGALAVAPGAAARPEGTLTVAVATFGNERWLPHLYVGAEDVVLKPLWENLLSRDAKGDLIPMLAERWQVTDGGRTWKFHLRKGVRFHNGTELTAEDVKFTFASIARDGSANSMAPEFRTIKSMEVEGPYTISLRFDKPFVTLGNRVTQGLFASVAYIQSRKHIETAGEQGAERQPLGTGPWKFVEHVRGDRIVYEAVENHWRAVPHFKRLVFLKVPEPATRMAMLRAGGADVIEIGGEYLDELKKVGIRTLVMPNVAAVWVILGGQWPTKPSYDPKVPWAQPDAERAKKVRLALNLAVDKKAIFERVLGGVGTPVGTVNYYPTDPWISDALLKPVPYDPPKAKALLAEAGYPNGFEITMNLTAWPGRGYLPDVGEAVATYWERVGLKVKRRPVDRAVFSADFRARSYAGVALAYAGPIIAPEPWELFARIAQTKSAVHLLVEHPKLDAFIDRLATEPSAAERTRIMREEMGPWLYDYMPAVSIGATHSIAGVGPKVGEWPLIPGHMGIHNWEYVTRK*