ggKbase home page

PLM1_100_coex_sep16_scaffold_1416_10

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 10344..10616

Top 3 Functional Annotations

Value Algorithm Source
dioxygenase, ferredoxin subunit bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 85.0
  • Bit_score: 147
  • Evalue 3.40e-33
dioxygenase, ferredoxin subunit similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 86.0
  • Bit_score: 108
  • Evalue 8.40e-22
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 87.0
  • Bit_score: 157
  • Evalue 4.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGGGCGACGGGCAGGCGCGGGTGGTGGAGGCCGAGGGCAGGACGCTGGCGCTCTTCAACGTCGGCGGGACGCTCTATGCGCTGGACAACTCGTGCGCCCACCGCGGGGGCCCGTTGGGCGAGGGGGATCTGGAGGGCCGGATCGTCATCTGTCCCTGGCACGCGTGGCGGTGGGACGTGACCACCGGCGCCAACGCCAACAATCCGGCCGTCAAGATGGCGTGCTATCCGGTGCGGGTCGAAGGGAACGGGATCTTCATCGAGCTCGGTTGA
PROTEIN sequence
Length: 91
VGDGQARVVEAEGRTLALFNVGGTLYALDNSCAHRGGPLGEGDLEGRIVICPWHAWRWDVTTGANANNPAVKMACYPVRVEGNGIFIELG*