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PLM1_100_coex_sep16_scaffold_251_15

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(17347..18708)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 454.0
  • Bit_score: 696
  • Evalue 1.70e-197
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 458.0
  • Bit_score: 512
  • Evalue 9.80e-143
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 453.0
  • Bit_score: 700
  • Evalue 1.30e-198

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1362
GTGGCCGGCGAGCACATCCTGATCGTCGACGACGAGCCGGCGATCCGCAAGGCGTTGCGCGACGTCCTCGAGGACGAGGGCTACCGGGTGAGCGCGGTGGGCAACGGGCCCGACGCGCTCAAGGCGGTCGTCGACGAGCTCCCCGACCTCGTCTTCATGGACATCTCGATGCCGCGTATGGACGGCCTGGAGGCGCTGGCCGAGCTCAAGCGTCTGCGGCCGGAGGCCACCGTGGTCATGATCTCCGGCCACGGCACCATCGAGACGGCGATCAAGGCCACGCGCCTGGGCGCCTGGGACTTCATCGAGAAGCCCCTGTCGCTCGAGAAGACGCTCGTCACGGTGAGCCGCGCCCTCGAGCACGGCCGGCTGGAGCGCGAGAACGCCGCGCTGCGGGCCCAGATCGACGAGCGCTCCGAGATCATCGGCGACAGCGCGCCCATGCGCGGGCTGCGCGAGCAGATCGGCATCGCCGCCCCCAGCAGCGGGCGCGTGCTCATCCACGGCGAGAACGGCAGCGGCAAGGAGCTCGTGGCCCGGGCCATCCACGCGCTGTCGGCGCGGGCCGAGCGGCCGTTCGTCGAGGTCAACTGCGCCGCCATCCCCGAGGAGCTGATCGAGTCGGAGCTGTTCGGGCACGAGCGCGGCGCCTTCACCGGCGCCCACTCCCGCCGCCGCGGCAAGTTCGAGACGGCCGACCGCGGCACCCTGTTCCTCGACGAGATCGGCGACATGAGCCTCAAGACGCAGGCCAAGGTGCTGCGCGCGCTCGAGGAGCAGGCCTTCGAGCGGGTGGGAGGCCGGGAGACGCTGAAGGTCGACGTCCGCGTCATCGCCGCCTCCAACCGCGACGTCGTGTCCCTCATCGCCCAGGGCGGGTTCCGCGAGGACCTGTTCTATCGCCTCAACGTGATCCCGATCGAGGTGCCGCCGCTGCGCGTCCGCAAGGAGGACGTGCCGGCGCTGGTCGACCACTTCATCCGCGTGTTCTGCGCCGAGAACGGCAAGCGGCTCAAGACGGTGGCGGCGGCCGCGCTGACGTACTTCATGACCTACGAATGGCCCGGCAACGTGCGCGAGCTGCGCAACATGGTCGAGCGCCTCGTCATCATGGTGCCCGGCGACACCATCGGCGCCGAGGATCTGCCCCCGCCGCTCCGGCCCAAGACCGACGGCCCGGTGGTGACCCCGGGCGACGGCAAGCCGTTGAAGGAGGCGCGCGACAGCTTCGAGCGCGCCTACATCCTGGCCGAGCTGCGCGCCCAGGAGTGGAACATGACCCGGACCGCCGAGCGCCTGGGCATCGAGCGCAGCCACCTCTACCGGAAGATCCGGGCCTACGGCATCACGCCCCCGAAGTAG
PROTEIN sequence
Length: 454
VAGEHILIVDDEPAIRKALRDVLEDEGYRVSAVGNGPDALKAVVDELPDLVFMDISMPRMDGLEALAELKRLRPEATVVMISGHGTIETAIKATRLGAWDFIEKPLSLEKTLVTVSRALEHGRLERENAALRAQIDERSEIIGDSAPMRGLREQIGIAAPSSGRVLIHGENGSGKELVARAIHALSARAERPFVEVNCAAIPEELIESELFGHERGAFTGAHSRRRGKFETADRGTLFLDEIGDMSLKTQAKVLRALEEQAFERVGGRETLKVDVRVIAASNRDVVSLIAQGGFREDLFYRLNVIPIEVPPLRVRKEDVPALVDHFIRVFCAENGKRLKTVAAAALTYFMTYEWPGNVRELRNMVERLVIMVPGDTIGAEDLPPPLRPKTDGPVVTPGDGKPLKEARDSFERAYILAELRAQEWNMTRTAERLGIERSHLYRKIRAYGITPPK*