ggKbase home page

PLM1_100_coex_sep16_scaffold_1574_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1723..2184)

Top 3 Functional Annotations

Value Algorithm Source
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] bin=bin7_NC10_sister species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 151.0
  • Bit_score: 213
  • Evalue 1.10e-52
NADH (or F420H2) dehydrogenase subunit C similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 148.0
  • Bit_score: 120
  • Evalue 2.10e-25
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 150.0
  • Bit_score: 224
  • Evalue 5.20e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGACCGCGCTCACGCCCGCCGCTGCCTCGTCGCAGATCCAGGCGCGCTTCGGCGTCGCCCCTTCCGCCGAGGGCCACGAGCTGTCGCTGACCCTGCCGCTCGAGCGCTGGCAGGAGTTCGGGCGGTTCGCCAAGGACACGCTCGAGTGCCGCTACTTCAACTGGCTCACCGCGGTGGACTGGAAGGAGCAGGGCCTGGAGGTCGTGGCCCGGCTCGACAACCTCGACGCGGGGGTGGCGGTGAGCATGCGTACGCGGCTGCCGGCCGGAGCCACGCGCTGCCCGTCGCTGACGGGCGTCTTCCGCGGCGCCGACTGGATGGAGCGCGAGTGCTACGACATGTTCGGCGTGGTGTTCGAGGGCCACCCGAATCTGAAGCGGATCCTGCTCAGCGACGACTGGGAGGGCTATCCGCTGCGCAAGGACTACGCGGTCGACACGCCCCAGGCGCCATACCGGTGA
PROTEIN sequence
Length: 154
VTALTPAAASSQIQARFGVAPSAEGHELSLTLPLERWQEFGRFAKDTLECRYFNWLTAVDWKEQGLEVVARLDNLDAGVAVSMRTRLPAGATRCPSLTGVFRGADWMERECYDMFGVVFEGHPNLKRILLSDDWEGYPLRKDYAVDTPQAPYR*