ggKbase home page

PLM1_100_coex_sep16_scaffold_1604_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(19..543)

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 156
  • Evalue 6.80e-36
peptide deformylase bin=bin7_NC10_sister species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 172.0
  • Bit_score: 221
  • Evalue 3.60e-55
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 174.0
  • Bit_score: 258
  • Evalue 3.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGCCGTCCTGAAAGTCCGTCGCTACGGCGACCCGGTGCTGCGGCGTCGTGCCACTGCCGTCGAGACGGTGACGCCGGACACGCGCCGCCTGGTCGACGACATGATCGACACGATGTACGACGAGGTCGGCATCGGACTGGCCGCACCCCAGGTCGGCGCCTCGGTGCGGTTGCTGGTCGTGGGCGACGAGGAAGGACGCGGCGCCCAGGCGCTCGTCAATCCCACCATCACCGCGCAGGGCGGCCAGGTCACGGCCGAGGAAGGCTGCCTGTCGCTGCCCGGCATCTTCGCGCAGGTCACACGCTCCGAGTGGGTGACACTGGAAGCCCAGGACATCGACGGTCGGCCGATCGCCATCACGGCCCGCGGCCTGCGGGCCCGGGTGTTCCAGCACGAGATCGATCACCTCGACGGCGTGCTGTTCATCGACCGGCTGGAGCCCGTCGTGCGCGACCGCATCAAGCGCCGGATCAAGAAGGACGGCTTCAGCGAGGACACCGCCCACCGCGCCTTCGCGCTGTAG
PROTEIN sequence
Length: 175
MAVLKVRRYGDPVLRRRATAVETVTPDTRRLVDDMIDTMYDEVGIGLAAPQVGASVRLLVVGDEEGRGAQALVNPTITAQGGQVTAEEGCLSLPGIFAQVTRSEWVTLEAQDIDGRPIAITARGLRARVFQHEIDHLDGVLFIDRLEPVVRDRIKRRIKKDGFSEDTAHRAFAL*