ggKbase home page

PLM1_100_coex_sep16_scaffold_397_10

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 8178..9704

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Massilia niastensis RepID=UPI00036F0331 similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 493.0
  • Bit_score: 146
  • Evalue 4.30e-32
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:KFC63122.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.7
  • Coverage: 489.0
  • Bit_score: 154
  • Evalue 2.20e-34
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 26.5
  • Coverage: 505.0
  • Bit_score: 118
  • Evalue 3.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
GTGGCGGTGTGCCTCGAGGTCGAACGCGCCTCGCCCTCGCTGCTGCGCTCGGGGCTGTCGTCCGTTGCCGTGTCCGTCCTCGGTGTCGCGCTGGGATTCGTCTCGGTGCCGGTGATGGTCTCGGGCCTCGGCTACGCCGACTACGGCGCGTACAGCATCGCCTTCACCGTCGCCGGGTACGGCGCCTTCCTCGACCTCGGCTTTGGCTGGGCGGGGATGCGGTTCGCGGCCGACGCTCACGCTCGGCAGGATCGGGAGGCGGTCGTCGGTGTGCTCCGGGCCCTCGTGCTCTATCAGGCGACGATCGGCGGCGCGGTGTTGGTGCTGCTCGTCGCCGGCGCCGACCGGCTCGGCCACTGGCTGGTGGCGGGCCCCGGCGCCGACGCCGCCCGTATCGCCGCCGTCCTGCCCATCGCCGGTGTGTGGTTCGCGATCGCCGGCCTCAACGGGATCTTCCTCGGCATGCTTCGCGGCGTGGGTCGCTACGGCGCCGCCGCCGGCGTCGCCAGCACGATGGTGCTCCTCGGAGTGGGAGGAGGCGCGATCCTGGTAGGGCAGGGCCACGGACTGCAGGCGGCCGCGCTCTGCCAGGTCGCCGGAGCGCTGGCGGCGGCCGGGCTGGCGGTCGTGGCGCTGCGGGATCTCCTGGGGGCGCGCTCCCACGCCGGCGCCTCATCCGCGGGACAGCTGAAGCGGATGCTGAGCTTCTCGCTGTGGAGTTTTCTGGGCCGCCTCGTGCAGGTCGCGATACTGCAGGGCGACAAGGTGATCGTGGCCCGGCTGGGTGGCGCGGCCGGGCTCGCCTCGTACATCGTGCCATTCGGCGTCGCCCAGCGGCTCAACCTCCTCGGCTCGGCGGCGGTGACGGCCGTCTATCCGGTGGCGGCGGGAAGCCGCCAGTCACGGAGCGACTTTCTCGAGACCTACTTCCGGGCCGCGCGCGTCGTGCACCTCTTCACGGCCGCGCCGGCGATCGCGCTGCTGGTGTGGGCCCCGCTGTTCCTGCACTCGTGGATCGGCCCCGAGATGGCGGCGTCGGGCGCCGGGTTTTTGCGCGCCCTCGCGCTGGGCTACTGGGTCGTGTCCGTCGCCTCGGTGGAGGCGGGTTGCCTCGAAGGCTGGGGGCATCCGCGCATCACCGCGCTCGCCGCGGTGGGAAGCCTGGCCGTCGCCGCGGTGGTCGCGGTGGTGCTGGCGACGACGGGCGGCCGGCTGTGGGCCGTCGCCGGTGCGGTGAGCGCCTGGATGGCGACCACCGGGCTCGTCACCGTGATCGCGTGGTACCGGGTCTCCGGCTTTCCGGCGGGGCGGCTCTGGAACGAGCTGGTGCGGCCGATCGGCGAGATGGTGGTGCTCGCCGTCGTGGCGGCCGAGGTCTCCGGTCGCTGGTTGACGCCGGGTCCATGGGGACTGCTCGCGTGTGCCGGCCTGGTCGCGCTCCTGCTCGTCTACGGGTTCGTCCGCCTCTTTCCCCACGGGGAAGGCCGGGCGTTGCTCGGCCGGGTCGTGCGCGCCACCGCCTCGTGA
PROTEIN sequence
Length: 509
VAVCLEVERASPSLLRSGLSSVAVSVLGVALGFVSVPVMVSGLGYADYGAYSIAFTVAGYGAFLDLGFGWAGMRFAADAHARQDREAVVGVLRALVLYQATIGGAVLVLLVAGADRLGHWLVAGPGADAARIAAVLPIAGVWFAIAGLNGIFLGMLRGVGRYGAAAGVASTMVLLGVGGGAILVGQGHGLQAAALCQVAGALAAAGLAVVALRDLLGARSHAGASSAGQLKRMLSFSLWSFLGRLVQVAILQGDKVIVARLGGAAGLASYIVPFGVAQRLNLLGSAAVTAVYPVAAGSRQSRSDFLETYFRAARVVHLFTAAPAIALLVWAPLFLHSWIGPEMAASGAGFLRALALGYWVVSVASVEAGCLEGWGHPRITALAAVGSLAVAAVVAVVLATTGGRLWAVAGAVSAWMATTGLVTVIAWYRVSGFPAGRLWNELVRPIGEMVVLAVVAAEVSGRWLTPGPWGLLACAGLVALLLVYGFVRLFPHGEGRALLGRVVRATAS*