ggKbase home page

PLM1_100_coex_sep16_scaffold_569_7

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(5069..7840)

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC, subunit A bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 929.0
  • Bit_score: 1320
  • Evalue 0.0
uvrA; excinuclease ABC subunit A similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 915.0
  • Bit_score: 1102
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 923.0
  • Bit_score: 1535
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2772
ATGCCCCGACCCTCGGGGCTCCGGATCGAGGGAGCCCGCCAGAACAATCTCAAGAACATCTCGCTCGAGATTCCCCACGATCGGCTCACCGTCATCACCGGCGTTTCCGGCTCCGGCAAGTCGTCGCTGGCCTTCGACACGCTGTTCGCCGAGGGCCAGTGGCGGTACATCGAGTCGCTCTCGACGTATGCGCGCATGTTCCTCGATCGCGTCGACCGGCCCGACGTGGATCGGATCGAGAACATCCGGCCCGCCATCGCCCTCGAGCAAAAGAACCCCGTGCGCACCGCGCGCTCGACGGTCGGCACCGCCACCGAGGTGTACGACTATCTGCGGCTGCTCTACGCCAAGATCGGCCGCGTGCACTGTTCGCAGTGCGGCGCCGGCGCCGCCTCGCACTCGCCGGAGTCCATCGCCGACACGCTGCTGGCCGAGCACGGCGGCGCCCGCGCGCTGATCACCTTCCCGTTGCCGGTGCCGGCCGGGCAGCCGGTCGCCGACCTGTGGGCCGCGCTCACCCGGCGCGGCTTCGCGCGCGTCCTCGTGAACGGCGTCGTCGCCGACCTGGCGGCGGCGCCGCCGGCGGCGATCGACGGCGCGCTCGCGGTCGTGCTGGACCGGCTCGTGCTGGAGCCCGCGCACCGCGGCCGCCTCGTGGAGTCGATCGAGAGCGCGCTGCGCGAGGGCGGCGGCCAGCTCGCGGTGGAGTTCGTCGAGGGCGGCCGGCGCGCGTTCGCCGAGGCGTTCCGCTGCGCCGGGTGCGGCGCCGCGCTGGAGCGGCCGCAGCCGCTGCTGTTCTCGTTCAACCACCCGCTCGGCGCCTGCGCCGAGTGCAAGGGCTTCGGCAACGTCCTCAAGTACGACGAGGCCCTCGTCGTGCCCGACCGCACGCTGAGCCTCAGCAGCGGCGCCGTCGAGCCGTGGACGCACCCGTCGGGCCGCTGGTACCAGCGGGAGCTGCTCAAGGCCGCCAAGCGCTCCGAGGTCGATCCGACCCGGCCGTGGGAGGAGCTCGGCGAGCGCGAGCGCGCCTTCGTCTACGAGGGCGACGGCAAGTTCCCCGGCATCAACGGCTTCTTCGAGGAGATCGAGTCGTACCGCTACAAGCTGCACGTGCGCGTGTTCCTCTCGCGCTACCGCAGCCAGTCGCCGTGCCCGGTGTGCCGGGGCGCCCGGCTGAAGCCGCCGGCGCTGGCGGTGCGGGTGGCCGGCCGGACCATCGCGGAGTTCACGGCGCTCACCATCGAGGAGGCCGCCGCCGTGCTGGGCGACCTCAAGCTCACCGCCTGGGAGGCCGCGGTCGCCCGCGAGATCCTCCGCCAGCTCGGGGCCAAGCTCACCTTCCTGCTGCGGGTCGGCCTCGGCTACCTCACGCTCGGCCGGCAGACGCGCTCGCTGTCGGGCGGCGAGGCCCAGCGGATCAACCTCGCCAACCAGCTCGGCTCCCAGCTCGTCGGCACGCTCTACGTGCTCGACGAGCCCTCGATCGGCCTGCACGCGCGCGACACCATGCGGCTGGCCGATCTCTGCCGCGAGCTGGCCCAGGCCGGCAACACCGTGGTGGTGGTCGAGCACGATCGCGGGTTCATCGAGGCGGCCGACCACGTCGTCGAGCTGGGCCCGGGCTCGGGCGAGCGCGGCGGTGAGATCGTCTTCGCGGGATCGCAGGCCGAGTTCCGCAAGGACACGCGCTCGCTGACCGCGCGCTATCTGTCCGGGCGGGAGACGATTCCGCTGCCGCTGGTGCGACGTCCCGGGCGCCGCCACCTCGTCCTCACCGGCGCCCGCGAGCACAACCTGAAGGACGTGACGCTGCGGGTGCCGCTGGGCACGCTGACGGTCGTCACCGGCGTCTCCGGCTCCGGCAAGTCCACGCTCGTGCACGACACGCTCTACCGGGCGGCCGCCCGCGCGTTCAAGACCGAGTTCCTCTCGCCGGGCGCCTACGACGCCCTCATCGGGCTCGAGTACCTCAAGGGCGTGCGGCTCATCGACCAGGAGCCGATCGGGCGCACGCCCCGCTCCAACCCCGTCACCTACGTCAAGGCGTTCGACGAGATCCGCAAGCTGTATGCCGCGCTGCCCCGGGCCAAGACGCTCGGACTCGGCGCCGGCGCGTTCTCGTTCAACGTCCCGGGCGGGCGCTGCGAGTCGTGCCAGGGCGACGGCTTCCAGAAGCTCGAGATGTACTTCTTCGAGGATGTGTACGTCTCCTGCCAGGAGTGCGAGGGGCGCCGCTACCGGCCCGAGGTGCTCGGCGTGAAGTATCGCGGCCGCTCGATCGGCGACGTGCTGCGCATGACGGTGGACGAGGCCGTCGAGTTCTTCGCCGGCCAGCACACGCTGGCCCGGCGGCTGCGCGTGATGCAGGACGTCGGCCTCGGCTACCTGCGCCTGGGCCAGCCGGCCACGACGCTGTCGGGGGGCGAGGCCCAGCGGCTCAAGATCGCCGCCGAGCTGGGCGGCCGCGCCACCGGCGACGTCCTCTACATCCTCGACGAGCCGACGACCGGGCTGCATCTCGACGACGTCAAGAAGCTGCTCGGCGTGCTCCACCGTCTCGTCGACGCCGGCAACACGGTGCTGGTCGTCGAGCACCACCTCGACGTCGTCAAGTGCGCCGACCACGTGATCGACCTCGGCCCCGAGGGCGGCGACGCCGGCGGCGAGATCGTCGCCGAGGGATCGCCCGAGCACATCACGCAGACGCCAGGGTCCTACACGGGAAAATTCCTGGCGGAGGTCCTGCCGAAGACGCACGGCAAGCGCTAG
PROTEIN sequence
Length: 924
MPRPSGLRIEGARQNNLKNISLEIPHDRLTVITGVSGSGKSSLAFDTLFAEGQWRYIESLSTYARMFLDRVDRPDVDRIENIRPAIALEQKNPVRTARSTVGTATEVYDYLRLLYAKIGRVHCSQCGAGAASHSPESIADTLLAEHGGARALITFPLPVPAGQPVADLWAALTRRGFARVLVNGVVADLAAAPPAAIDGALAVVLDRLVLEPAHRGRLVESIESALREGGGQLAVEFVEGGRRAFAEAFRCAGCGAALERPQPLLFSFNHPLGACAECKGFGNVLKYDEALVVPDRTLSLSSGAVEPWTHPSGRWYQRELLKAAKRSEVDPTRPWEELGERERAFVYEGDGKFPGINGFFEEIESYRYKLHVRVFLSRYRSQSPCPVCRGARLKPPALAVRVAGRTIAEFTALTIEEAAAVLGDLKLTAWEAAVAREILRQLGAKLTFLLRVGLGYLTLGRQTRSLSGGEAQRINLANQLGSQLVGTLYVLDEPSIGLHARDTMRLADLCRELAQAGNTVVVVEHDRGFIEAADHVVELGPGSGERGGEIVFAGSQAEFRKDTRSLTARYLSGRETIPLPLVRRPGRRHLVLTGAREHNLKDVTLRVPLGTLTVVTGVSGSGKSTLVHDTLYRAAARAFKTEFLSPGAYDALIGLEYLKGVRLIDQEPIGRTPRSNPVTYVKAFDEIRKLYAALPRAKTLGLGAGAFSFNVPGGRCESCQGDGFQKLEMYFFEDVYVSCQECEGRRYRPEVLGVKYRGRSIGDVLRMTVDEAVEFFAGQHTLARRLRVMQDVGLGYLRLGQPATTLSGGEAQRLKIAAELGGRATGDVLYILDEPTTGLHLDDVKKLLGVLHRLVDAGNTVLVVEHHLDVVKCADHVIDLGPEGGDAGGEIVAEGSPEHITQTPGSYTGKFLAEVLPKTHGKR*