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PLM1_100_coex_sep16_scaffold_1259_4

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 981..1493

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 168.0
  • Bit_score: 246
  • Evalue 1.30e-62
ECF family RNA polymerase sigma subunit similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 171.0
  • Bit_score: 150
  • Evalue 3.70e-34
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 170.0
  • Bit_score: 302
  • Evalue 2.20e-79

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCCGATCTCGACTTCCAGCGCCAGGCCCTCGCCCACCTCGACGCCCTCTACAACTTCGCGATGTACCTGACCAAGCGGCCGCCCGACGCCGACGACCTGGTCCAGGAGACGTACCTGCGAGCGTTCAGGTTTTCTCATCGGTTCCAGCCGGGAACCCACCTTCGGGCGTGGTTGTTTCAGATTCTGAGAAACACGTTCCTGACGTTCTACCGGGTCCGCGAGCGGGAGTCCCCGGTCGCCGAGGACGGCGTCCCCGAATGGGACGTCCCGATGTTCCATCACGCCCCGGAGAACGACGGGACCGCGATGGACGCCCACACCGATCTCGAGCGGGCCATGCGCCGCCTGCCTGAGGAGTTCCGCACGGTGCTCCTGCTCGCCGAGGTCGAGGGTCTCCCGCTGGAGGAGGTGGCCCGGGTCATGGCCTGCCCGGTCGGCACGGTGAAGTCGCGGATCTTTCGGGCCAAGGAGCGGCTGCGAGGCCTGCTCCGCGACTACGAGACGAAATGA
PROTEIN sequence
Length: 171
MADLDFQRQALAHLDALYNFAMYLTKRPPDADDLVQETYLRAFRFSHRFQPGTHLRAWLFQILRNTFLTFYRVRERESPVAEDGVPEWDVPMFHHAPENDGTAMDAHTDLERAMRRLPEEFRTVLLLAEVEGLPLEEVARVMACPVGTVKSRIFRAKERLRGLLRDYETK*