ggKbase home page

PLM1_100_coex_sep16_scaffold_1275_5

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3868..4425)

Top 3 Functional Annotations

Value Algorithm Source
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 186.0
  • Bit_score: 183
  • Evalue 1.10e-43
fimbrial assembly family protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 167.0
  • Bit_score: 90
  • Evalue 3.70e-16
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 185.0
  • Bit_score: 231
  • Evalue 6.70e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGATCCGGATCAATCTCGCCCCCCTCGAAGCCCGGCGCCGCCTGCCGGCGATGAGCCTGTCGGTCCCGTCGTTCAACCTCGGGATCCTGTTCGGGATCCTCTACGTGCTCGCCGTCGCCGGCCTCAGCTTCTACTGGTACGGGCTGCTGTCCGAGGAAAGCACGCTCGCCGCCGACGTCGATCGCCTCAACCGCGAGCTGGCCTCGCTGAAGACCACGATCGGTGAGGGCGCCAGCGTCAAGACCCAGCTGAACGAGGTGAAGCGGCGGGTGACGATCCTGGAAGACCTCACCAAGGGTCAGGGCCGGTCGATCGTCCTCCTCGACTCGTTCATCGACACCGTCCCCCGCGACCTGTGGATCACCAGCCTCGAGCAGAAGGACTTGGTGTTGAGACTGGGCGGCACCGCCTTTTCGACGACCGCGGTCTCGGACTTCATGTCGAACCTCAAATCCTCCGGAAAGTTCAAGGACGTCGACATCGTCGTCTCCCGACAGGCGATCGACAAGACACCGAGCCTCGTGACCTTCGAGGTCACGTGCAAGTTCGAGATCTGA
PROTEIN sequence
Length: 186
MIRINLAPLEARRRLPAMSLSVPSFNLGILFGILYVLAVAGLSFYWYGLLSEESTLAADVDRLNRELASLKTTIGEGASVKTQLNEVKRRVTILEDLTKGQGRSIVLLDSFIDTVPRDLWITSLEQKDLVLRLGGTAFSTTAVSDFMSNLKSSGKFKDVDIVVSRQAIDKTPSLVTFEVTCKFEI*