ggKbase home page

PLM1_100_coex_sep16_scaffold_1151_17

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(16209..16484)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein involved in formate dehydrogenase formation bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 83.0
  • Bit_score: 122
  • Evalue 2.00e-25
formate dehydrogenase formation protein FdhE, putative similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 84.0
  • Bit_score: 57
  • Evalue 1.70e-06
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 87.0
  • Bit_score: 122
  • Evalue 2.80e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 276
GTGTGCCCGCTCTGCGGCAACCGGACGAGCAAGGACTTCGTGCGGCTGCTCGCCGAGGGCGCCGACGAGGGATACGCCATGGCCGCGTGTCGCGCCTGCCGCGGCTATGTGAAGGAGCTGGATCGGCGTCTGCGCTGGAACGCCGGGTCCGCGCTGGTCGAGGATTGGGGCTCGCCCCATCTCGACTTCATCGCCCACCGCCAGGACTACTGGCGCCCGATCCCCACGCTGGTCCAGCTCATCCCGCCGGCTCCGGACGAGGCCGCCGAGAGCTGA
PROTEIN sequence
Length: 92
VCPLCGNRTSKDFVRLLAEGADEGYAMAACRACRGYVKELDRRLRWNAGSALVEDWGSPHLDFIAHRQDYWRPIPTLVQLIPPAPDEAAES*