ggKbase home page

PLM1_100_coex_sep16_scaffold_2067_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2002..3117)

Top 3 Functional Annotations

Value Algorithm Source
Exopolysaccharide biosynthesis protein bin=GWC2_Methylomirabilis_70_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 361.0
  • Bit_score: 321
  • Evalue 7.10e-85
polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 294.0
  • Bit_score: 152
  • Evalue 1.20e-34
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 358.0
  • Bit_score: 525
  • Evalue 5.90e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1116
GTGACCCGTAGCGTGCTCCGCCGTCGGCCGTCCCACCCGGTCGCCTGTATCTTGCTCCTGGCGGCGCTGCTGGCCGGTGCCGTGTCCACGGCCCAGGAGTACACGATCGGCCCCGGCGACCTGCTCAAGATCACGGTCTGGGGGCACGACGACCTCTCCAAGGAGTACCCGGTGACGCTGGACGGCCGGGTGCCGTTCCCGCTCATCGGCACCGTGCAGGCGGCCGGGCTCACGACCAGCGAGCTGGCCACCCGACTGCGCGATCTGCTCGAGAAGGACTACCTCGTCAATCCGCAGGTGATCGTCGCGGTCAAGGACTACCTGTCCAGCAAGGTCCACGTGTTCGGCGAGGCGGAGAAGCCGGGTCTGTTCTACTTGACCGGGCCCACCACGCTGCTGGAGCTCCTCTCCAAGGCGGGAGGCCTCTCCAAGGCCGCCGGCAAGGACCTCGTGCTCGTGCGGACGGAGACGGGCAAGGGCGGGGGCAAGGCGGTCGCCGGCAGCACGGTGCTCCTGCGGCTGGACGTGCGCAAGATCCAGGCGGGCGACGTCAAGGAGAACATCGTGCTGCAGAACGGCGACATGATGTTCGTGCCCAAGGCCTCGGCCTTCTTCGTCCTCGGCGAGGTCAACAAGGCCGGCACCTTCGCGCTCGACAAGGAGATCTCGGTGCTGGAGGCCGTCACGCTCGCCGGCGGCTTCAGCGGGACCGCCGCCCCCGCCGGCGTCAAGGTCCTCCGGCGGACCGCCGAGGGCAAGCAGGAGACGATCTCGATCGACCTCTCGGGCGCGGTGCCCCGGGACAAGAGCTTCCGGATCGAGGACGGCGACACCGTCATGGTGCCCAAGGGCAACACGTTCTTCGTCTTCGGCGAGGTCAAGAAGCCGGGCGCCTACCAGCTCGACAAGGAGACCAACGTCCTGGAGGGCATCACCATCGCCGGCGGCTTCACCGACAAGGCCGCCCCCGGCCGGACGCGCGTGATCCGCACCACCGACCGGGGCCAGCAGACGATCGCCGTGGACATGAACGACATCATCCGGCGCGGCCAGCGCGAGAAGGCCATCCGGCTGCTCGAGAACGACGTCATCGTCGTCCCGGAGAGCTTCTTTTGA
PROTEIN sequence
Length: 372
VTRSVLRRRPSHPVACILLLAALLAGAVSTAQEYTIGPGDLLKITVWGHDDLSKEYPVTLDGRVPFPLIGTVQAAGLTTSELATRLRDLLEKDYLVNPQVIVAVKDYLSSKVHVFGEAEKPGLFYLTGPTTLLELLSKAGGLSKAAGKDLVLVRTETGKGGGKAVAGSTVLLRLDVRKIQAGDVKENIVLQNGDMMFVPKASAFFVLGEVNKAGTFALDKEISVLEAVTLAGGFSGTAAPAGVKVLRRTAEGKQETISIDLSGAVPRDKSFRIEDGDTVMVPKGNTFFVFGEVKKPGAYQLDKETNVLEGITIAGGFTDKAAPGRTRVIRTTDRGQQTIAVDMNDIIRRGQREKAIRLLENDVIVVPESFF*