ggKbase home page

PLM1_100_coex_sep16_scaffold_2937_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(504..1586)

Top 3 Functional Annotations

Value Algorithm Source
leuB; 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) (EC:1.1.1.85) similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 357.0
  • Bit_score: 444
  • Evalue 1.50e-122
3-isopropylmalate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 359.0
  • Bit_score: 563
  • Evalue 1.00e-157
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 359.0
  • Bit_score: 567
  • Evalue 7.70e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGACGTTCAAGATCGCAGTCCTGCCCGGGGACGGGATCGGGCCGGAGGTCGTCGCCGAGGCCGTGCGCGTGTTGCACGCCGTCGGCAAGGGCGGGAGCGCCTCGTTCGAGTTCGAGCAGGCGCTGGTGGGTGGTGCCGCCATCGACGCCACCGGCAGCCCGCTGCCTCCCCCGACGCTGAAGCTCTGTCAATCGTCCCACGCCATTCTCTTCGGCTCCGTGGGCGGCCCCAAGTGGGACAACCTCCCGCAGGAGCAGCGGGCCGAGCGGGGGCTGCTGGCCCTGCGCAAGGAGCTCGACCTCTACGCCAACCTCCGCCCGGCCACCTGCTTTCCGATGCTGGTCGACGCCTCGCCCCTCAAGCGCTCGGTCGTCGAGGGCACCGACATCATGGTGATCCGCGAGCTGACCGGCGGGCTCTACTTCGGCGAGCCGCGTGGGCGCACCGCGCTGGCCGGCGGCGGTGAGCGCGGCGTCAACACCATGGTGTACACGACGCCGGAGATCGAGCGGGTGGCGCGCGTCGGCTTCGACGTGGCCCGGAAGCGTCGCAAGCGCCTGACTTCGGTGGACAAGGCCAACGTGTTGACCGTGTCCCAGCTCTGGCGGGAGGTCGTGACGACGGTCGCCAAGGAGTACCCCGACGTGACGCTGGAGCACGTGCTGGTCGACAACTGCGCGATGGCCCTCGTCCAGAAACCGACGCACTTCGACACGATCGTGACGGAGAACACCTTCGGCGACATCTTGTCCGACGAGGCGGCTATTCTCGCCGGTTCGATGGGGATGCTGCCCTCGGCATCGATCGGAGGGCGGGTCGGCCTGTACGAGCCCGTGCACGGCACCGCCCCCGACATCGCCGGCCAGGGGATCGCCAACCCCATCGCGGCGATTTTGTCGGCAGCGATGCTCCTGAGGTACTCTCTAAATATGGGCCCCGAGGCCGATCGCATCGAGGCCGCCGTGCGGCGGGCCCTGGAGCAGGGGCACCGCACGCGCGACATCGCGGCCGCGGGTGACAAGGTGCTCGGCACCAGGGAGATGGCAGACGTGATCGTGCGCGGCGTGGAGCAAGGGTCCTGA
PROTEIN sequence
Length: 361
MTFKIAVLPGDGIGPEVVAEAVRVLHAVGKGGSASFEFEQALVGGAAIDATGSPLPPPTLKLCQSSHAILFGSVGGPKWDNLPQEQRAERGLLALRKELDLYANLRPATCFPMLVDASPLKRSVVEGTDIMVIRELTGGLYFGEPRGRTALAGGGERGVNTMVYTTPEIERVARVGFDVARKRRKRLTSVDKANVLTVSQLWREVVTTVAKEYPDVTLEHVLVDNCAMALVQKPTHFDTIVTENTFGDILSDEAAILAGSMGMLPSASIGGRVGLYEPVHGTAPDIAGQGIANPIAAILSAAMLLRYSLNMGPEADRIEAAVRRALEQGHRTRDIAAAGDKVLGTREMADVIVRGVEQGS*