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PLM1_100_coex_sep16_scaffold_3160_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..694)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 290
  • Evalue 2.40e-76
DNA-directed RNA polymerase subunit beta bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 236.0
  • Bit_score: 405
  • Evalue 2.30e-110
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 231.0
  • Bit_score: 456
  • Evalue 1.60e-125

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCAGGCACGATTCAGTGTGGGCGTCGCAGTCGCCGGGACTTCGGGAAGATCCCGTCCATCGTGGAGATCCCGAACCTCATCGAGGTGCAGAAGCGTTCCTACGAGACGTTTCTGCAGAAGGACGTCCCCGCCGAGCGACGGGAGGAGATCGGGCTGCAGGCGGTGTTCAAGTCGGTGTTTCCCATCGCCGACTACAACGACAACGCGCTGCTCGAGTTCGACTCGTACCATTTCGGGGATCCGAAGTACACGGTGGAGGAGTGCCACGATCGCGGCATGACCTTCGCGATCCCGCTGAAGGTCACGCTGCGCCTGGTCGTGTTCGACCACGACAAGGAAGCCAAGACCAAGACGATTCGAGAACAGCGGGGTCAGGAAGTCTATCTCGGTGAGCTTCCGTTGATGACGGACAAGGGCACCTTCATCATCAACGGCACCGAGCGCGTGGTCGTCAGCCAGCTGCAGCGCTCGGCCGGCGTCTTCTTCGACGATGACAAGGGCAAGACGCTGGCGTCCGGCAAGCCGCTCTACTCGGCCCGGGTCATCCCCTATCGCGGTTCCTGGGTCGAGTTCGACTTCGACGCCAACGACCTGCTGCACGTGCGCGTCGACCGGCGGCGGAAGATGTACGCCACCGCCTACCTGCGCGCGTTCTGGTTCCTGGAGAAGGGCGTCGTCCTCTCCGACGAG
PROTEIN sequence
Length: 231
MAGTIQCGRRSRRDFGKIPSIVEIPNLIEVQKRSYETFLQKDVPAERREEIGLQAVFKSVFPIADYNDNALLEFDSYHFGDPKYTVEECHDRGMTFAIPLKVTLRLVVFDHDKEAKTKTIREQRGQEVYLGELPLMTDKGTFIINGTERVVVSQLQRSAGVFFDDDKGKTLASGKPLYSARVIPYRGSWVEFDFDANDLLHVRVDRRRKMYATAYLRAFWFLEKGVVLSDE