ggKbase home page

PLM1_100_coex_sep16_scaffold_3160_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1161..1784)

Top 3 Functional Annotations

Value Algorithm Source
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 170.0
  • Bit_score: 221
  • Evalue 5.60e-55
50S ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 175.0
  • Bit_score: 143
  • Evalue 4.20e-32
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 238
  • Evalue 6.20e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGCCAACGCAAGAGAAGGTCGAGACGATCGAGGATCTCAAGTCGCGGCTGCAGGGCGTCAAGACGGTGCTCCTCGCCGAGTATCGCGGGCTGACCGTGTCGCAGCTCTCCGACCTCCGCAAGCAGCTCAAGGCGGTGTCGGCCGAGTACAAGATCGTGAAGAACCGGCTGGCCCGGCTGGCCATCGTCTCGTCGGACGTCGCCGGGCTGGGCCCCGCTCTCAAGGGCCCGACCGGCATGGTGCTGGCCAAGGGCGACCCGGTCAGCGTGGCCAAGACGCTGCAGACGTTCGCCAGGACCCACCAGGCGCTCGTCCTGAAGGTCGGCGTCGTCGACGGCCAGATGCTGGATCCGGCCGGCCTCAAGGCGCTGGCCGACCTGCCGTCGCGCGAGGCGTTGCGCGCCCAGATCGTCGGCGCCCTGCAGGGTCCGCTCGCGCAGCTGGTCGGCCTGCTCCAGGCGCCGCAGCGCGATCTCGTGTACGTCCTGGAGCAGCATGGCAGTGCGAGCCGAGCCGGTGCCTCCGGCGAGGCGAGCCGCGAAACGGCAGGCAGTGCGAGCCAAGCCGGTGCCTCCGGCGAGGCGAGCCACGAAACGGCAGAGAATTCGTCGGACAAGAAATAA
PROTEIN sequence
Length: 208
VPTQEKVETIEDLKSRLQGVKTVLLAEYRGLTVSQLSDLRKQLKAVSAEYKIVKNRLARLAIVSSDVAGLGPALKGPTGMVLAKGDPVSVAKTLQTFARTHQALVLKVGVVDGQMLDPAGLKALADLPSREALRAQIVGALQGPLAQLVGLLQAPQRDLVYVLEQHGSASRAGASGEASRETAGSASQAGASGEASHETAENSSDKK*