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PLM1_100_coex_sep16_scaffold_3509_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1..588)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 196.0
  • Bit_score: 206
  • Evalue 1.30e-50
lptB; ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 187.0
  • Bit_score: 203
  • Evalue 3.20e-50
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 181.0
  • Bit_score: 277
  • Evalue 8.70e-72

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGAGCGCGGTGGCCCCGGCCGCCGCACTGCTGACCCTGGCGGGCGTCACCAAGCGCTTCGGCGGCCTCACCGCCGTGCGCGGGGTGAGCCTCGAGGTCCGCCCCGGCGACCTGGTCGGCATCATCGGCCCCAACGGCGCCGGCAAGACCACGCTCTTCAACGTCATCGCCGGCTACTACCGGCCCGACGAGGGCCGCGTGACCTTCGACGGCCGCGATGTGACGGCCCTGCCGGCCCACGCGATCTCGCGCCTGGGTCTCACCCGCACGTTCCAGATCGTGAAACCGTTCGGCAACCTCTCGGTGCGCGACAACGTGATGATCGGCGCGCTCACCCGCCGGGCGTCGGTTCGCGAGGCGCGCGCCGACGCCGAGCGCGTGATCGAGATCTGCGGCCTCGGCCCCCACGCCGGCGCCCGCGCCCGGGCGCTGCCGCTGGCCTTGCGCAAGCGCCTGGAGGTGGCCCGCGCGCTCGCCACGCGACCCCGTCTGCTGCTGCTCGACGAGGTGATGGCCGGCCTCAATCCGACCGAGCTGGGCGCGATGATCGACCTCGTCCGCCGCCTGCACGCCGAGGGCCTCACGTTG
PROTEIN sequence
Length: 196
VSAVAPAAALLTLAGVTKRFGGLTAVRGVSLEVRPGDLVGIIGPNGAGKTTLFNVIAGYYRPDEGRVTFDGRDVTALPAHAISRLGLTRTFQIVKPFGNLSVRDNVMIGALTRRASVREARADAERVIEICGLGPHAGARARALPLALRKRLEVARALATRPRLLLLDEVMAGLNPTELGAMIDLVRRLHAEGLTL