ggKbase home page

PLM1_100_coex_sep16_scaffold_3346_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(629..1066)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 121.0
  • Bit_score: 200
  • Evalue 7.10e-49
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 123.0
  • Bit_score: 123
  • Evalue 4.10e-26
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 121.0
  • Bit_score: 200
  • Evalue 1.00e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGGTCCCCGGGATGTCGGAGCCGGTCAGCCACTTCACCCACGTCGTCCGCGCCGGTCGACTCGTGTTCGTCTCCGGGTGCGTGGCCACCGACGGCGACGGCCGCGTCGTGGGCGGCAACGACGTCGTGGCCCAGACCCGGCAGACCCTCGAGAACATCAAGCGCTGCCTGGCCGCGGCCGGCGCCACCTTCGCCGACGTCTGCAAGGTGACGGTGTTCCTGCGCAACATCGGCGACCGCGAGAAGGTCAACACCGTCCGCAAGGAGTACTTCGGCGCCCACCGCCCGGCCAGCACGCTGGTCGAGATCTCGCGCCTCGTGCGTGACGACTACCTGATCGAGATCGAGGCCACCGCGGTCATTCCCGAGCGCCGCAGCGTGCCGTCCCGCGCCAAGGCCAAGGCGCGGCCCCGCCCGGCCCGGCGCCGGAGGAAGTGA
PROTEIN sequence
Length: 146
MVPGMSEPVSHFTHVVRAGRLVFVSGCVATDGDGRVVGGNDVVAQTRQTLENIKRCLAAAGATFADVCKVTVFLRNIGDREKVNTVRKEYFGAHRPASTLVEISRLVRDDYLIEIEATAVIPERRSVPSRAKAKARPRPARRRRK*